RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 KIFC1Q9BW19 673 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 FUT8Q9BYC5 575 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 FOXQ1Q9C009 403 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 MKRN2Q9H000 416 aaKnown RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 SAYSD1Q9NPB0 183 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 DLGAP2Q9P1A6 1054 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 SOX13Q9UN79 622 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 SIT1Q9Y3P8 196 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 MUC3AQ02505 3323 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 HEATR9A2RTY3 570 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 H0Y858 1186 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 KPNA3O00505 521 aaPredicted RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 AREL1O15033 823 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 MID1O15344 667 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 SLC7A4O43246 635 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 SPINT1O43278 529 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 LDB2O43679 373 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 ERLIN1O75477 346 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 BANF1O75531 89 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 USP1O94782 785 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 CRTAMO95727 393 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 TTC4O95801 387 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 IL1BP01584 269 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 IGLV3-19P01714 112 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 CYP2A6P11509 494 aaPredicted RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 ADRB3P13945 408 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 ZNF30P17039 623 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 TPH1P17752 444 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 GABRG2P18507 467 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 HNF1BP35680 557 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 HMGCLP35914 325 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 P2RY2P41231 377 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 ELK3P41970 407 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 CD151P48509 253 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 PSMD8P48556 350 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 NEK3P51956 506 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 METAP1P53582 386 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 EPHB1P54762 984 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 SESN2P58004 480 aaPredicted RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 PDE1BQ01064 536 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 ACVR1Q04771 509 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 CCDC15Q0P6D6 951 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 ELP6Q0PNE2 266 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 SFSWAPQ12872 951 aaKnown RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 POU6F1Q14863 301 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 FASTKD3Q14CZ7 662 aaKnown RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 TAF1AQ15573 450 aaPredicted RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 BBS9Q3SYG4 887 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 TMEM52BQ4KMG9 183 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 HSP90B2PQ58FF3 399 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 BEND6Q5SZJ8 279 aaPredicted RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 CFAP58Q5T655 872 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 TSTD2Q5T7W7 516 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 PIP5KL1Q5T9C9 394 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 CWF19L1Q69YN2 538 aaKnown RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 CRTC1Q6UUV9 634 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 USP30Q70CQ3 517 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 USP45Q70EL2 814 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 ERN2Q76MJ5 926 aaKnown RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 TRMT10CQ7L0Y3 403 aaKnown RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 DPPA4Q7L190 304 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 NLRP9Q7RTR0 991 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 TTC7BQ86TV6 843 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 KBTBD6Q86V97 674 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 CCDC25Q86WR0 208 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 TMPRSS6Q8IU80 811 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 IGDCC3Q8IVU1 814 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 GSPT2Q8IYD1 628 aaKnown RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 ZBED8Q8IZ13 594 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 TTC30BQ8N4P2 665 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 AADATQ8N5Z0 425 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 GOLGA6L1Q8N7Z2 621 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 FBXO36Q8NEA4 188 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 PYROXD1Q8WU10 500 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 STYXQ8WUJ0 223 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 STAMBPL1Q96FJ0 436 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 SGSM3Q96HU1 749 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 MRGPRX1Q96LB2 322 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 TTC25Q96NG3 672 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 PABPC3Q9H361 631 aaKnown RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 CDC42EP4Q9H3Q1 356 aaKnown RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 SEMA4AQ9H3S1 761 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 PLAC1Q9HBJ0 212 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 LRRC4CQ9HCJ2 640 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 POLMQ9NP87 494 aaPredicted RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 ITM2CQ9NQX7 267 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 DYRK4Q9NR20 520 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 TREX1Q9NSU2 369 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 PIH1D1Q9NWS0 290 aaKnown RBP7.22□□□□□ -1.25
NUP54-204ENST00000506098 SYBUQ9NX95 663 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 FZD4Q9ULV1 537 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 ZNF711Q9Y462 761 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 TCAF1Q9Y4C2 921 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 SPO11Q9Y5K1 396 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 FAM169AQ9Y6X4 670 aa7.22□□□□□ -1.25
NUP54-204ENST00000506098 TTC28Q96AY4 2481 aa7.21□□□□□ -1.25
NUP54-204ENST00000506098 KNL1Q8NG31 2342 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ZCWPW2A0A1B0GU75 182 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 TCRBV21S2A2A0A5A6 115 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ANKRD33BA6NCL7 494 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms