RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 RTN4RL1Q86UN2 441 aaPredicted RBP9.77□□□□□ -0.85
CSF1R-203ENST00000504875 TXNDC5Q8NBS9 432 aaKnown RBP9.77□□□□□ -0.85
CSF1R-203ENST00000504875 BPIFA1Q9NP55 256 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 EPS15L1Q9UBC2 864 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 ZSWIM8A7E2V4 1837 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 A0A088AWK7 358 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 E5RI56 91 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 TNFRSF10BO14763 440 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 MAGEB3O15480 346 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 ARSDP51689 593 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 NDST2P52849 883 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 INHBCP55103 352 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 TRIP4Q15650 581 aaPredicted RBP9.77□□□□□ -0.85
CSF1R-203ENST00000504875 PFKFB4Q16877 469 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 RANBP10Q6VN20 620 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 GALNT4Q8N4A0 578 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 FAM156AQ8NDB6 213 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 GDPD5Q8WTR4 605 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 STYXQ8WUJ0 223 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 NRG4Q8WWG1 115 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 SEPT8Q92599 483 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 SCLYQ96I15 445 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 TUBGCP5Q96RT8 1024 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 WDR41Q9HAD4 459 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 HMX1Q9NP08 348 aaPredicted RBP9.77□□□□□ -0.85
CSF1R-203ENST00000504875 VPS45Q9NRW7 570 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 UBA2Q9UBT2 640 aaPredicted RBP9.77□□□□□ -0.85
CSF1R-203ENST00000504875 POMPQ9Y244 141 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 SCN4AP35499 1836 aa9.77□□□□□ -0.85
CSF1R-203ENST00000504875 F8W8V4 182 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 MATN2O00339 956 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 PRRG1O14668 218 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 PGM3O95394 542 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 COL6A2P12110 1019 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 CHRM3P20309 590 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 HTR7P34969 479 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 CCNG1P51959 295 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 PRKAA2P54646 552 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 ZNF33AQ06730 810 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 PTK2BQ14289 1009 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 TMCO4Q5TGY1 634 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 DENND5AQ6IQ26 1287 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 GLT6D1Q7Z4J2 308 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 SETD3Q86TU7 594 aaPredicted RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 CUZD1Q86UP6 607 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 CCDC117Q8IWD4 279 aaPredicted RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 COLGALT2Q8IYK4 626 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 DSELQ8IZU8 1212 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 FBXW8Q8N3Y1 598 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 ICA1LQ8NDH6 482 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 ATP6V1E2Q96A05 226 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 OLFM1Q99784 485 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 S100A14Q9HCY8 104 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 SCUBE2Q9NQ36 999 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 TLL2Q9Y6L7 1015 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 A0A0D9SEW6 157 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 MTMR11A4FU01 709 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 OR6C75A6NL08 312 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 STX16-NPEPL1H3BU86 382 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 CD3EAPO15446 510 aaKnown RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 IPO13O94829 963 aaKnown RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 GOT2P00505 430 aaKnown RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 JUNP05412 331 aaKnown RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 SLC11A1P49279 550 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 PLD1Q13393 1074 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 FASTKQ14296 549 aaKnown RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 CD300LGQ6UXG3 332 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 LINGO4Q6UY18 593 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 ATG14Q6ZNE5 492 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 CARNMT1Q8N4J0 409 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 PTGR2Q8N8N7 351 aaPredicted RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 C2CD4AQ8NCU7 369 aaPredicted RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 KLHDC9Q8NEP7 349 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 SPPL2BQ8TCT7 592 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 CCDC126Q96EE4 140 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 ZNF419Q96HQ0 510 aaPredicted RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 NR1H4Q96RI1 486 aaPredicted RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 MID1IP1Q9NPA3 183 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 GKN1Q9NS71 199 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 CATSPERZQ9NTU4 200 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 MARCH4Q9P2E8 410 aaPredicted RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 RNF112Q9ULX5 631 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 TYW5A2RUC4 315 aaKnown RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 H0Y626 953 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 H7C4K7 107 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 SYN3O14994 580 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 LSM1O15116 133 aaKnown RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 DLG1Q12959 904 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 MED21Q13503 144 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 BFSP2Q13515 415 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 DHDDSQ86SQ9 333 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 TUBGCP3Q96CW5 907 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 IMP4Q96G21 291 aaKnown RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 C8orf48Q96LL4 319 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 RTKNQ9BST9 563 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 TTPALQ9BTX7 342 aa9.76□□□□□ -0.85
CSF1R-203ENST00000504875 UPF3AQ9H1J1 476 aaKnown RBP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.76□□□□□ -0.85
CSF1R-203ENST00000504875 TMEM161AQ9NX61 479 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms