RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 RNF144BQ7Z419 303 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 SMIM29Q86T20 159 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM72BQ86X60 149 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 DZIP1Q86YF9 867 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 LURAP1LQ8IV03 231 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 OR2C3Q8N628 320 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 MAB21L3Q8N8X9 362 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 ZNF114Q8NC26 417 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 ANKRD20A12PQ8NF67 263 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 GOLGA5Q8TBA6 731 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 SPATA18Q8TC71 538 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 KIAA1524Q8TCG1 905 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 ACMSDQ8TDX5 336 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 USP6NLQ92738 828 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 C18orf8Q96DM3 657 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 TBC1D31Q96DN5 1066 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CDCA5Q96FF9 252 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 ZNF414Q96IQ9 312 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM81BQ96LP2 452 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 ZNF385AQ96PM9 386 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 TEFMQ96QE5 360 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 PIGSQ96S52 555 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 RHOXF2Q9BQY4 288 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 DDX23Q9BUQ8 820 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 STK33Q9BYT3 514 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 BRD8Q9H0E9 1235 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 VCX3BQ9H321 246 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CERS4Q9HA82 394 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 ARNT2Q9HBZ2 717 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 PDRG1Q9NUG6 133 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 SPATS2LQ9NUQ6 558 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 TRMT1Q9NXH9 659 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 RABL2AQ9UBK7 228 aaPredicted RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 HERC5Q9UII4 1024 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CFAP45Q9UL16 551 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 GTF2A1LQ9UNN4 478 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 DHDHQ9UQ10 334 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 PAM16Q9Y3D7 125 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 ADAM18Q9Y3Q7 739 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 TTLL3Q9Y4R7 772 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 KLF2Q9Y5W3 355 aaPredicted RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 NCAPD3P42695 1498 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 NISCHQ9Y2I1 1504 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 UHRF1BP1LA0JNW5 1464 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SYNJ2BP-COX16A0A087WUM0 186 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 A0A096LPK6 155 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 A0A1B0GUL7 405 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 C2orf81A6NN90 581 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 H0YC42 278 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 GOLGA6L19H0YKK7 550 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 KIF2AO00139 706 aaPredicted RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SYN3O14994 580 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 HNRNPRO43390 633 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 STRNO43815 780 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 XPNPEP2O43895 674 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 DIAPH2O60879 1101 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 TBCAO75347 108 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 DAB1O75553 588 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 HEXIM1O94992 359 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 REC8O95072 547 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 YEATS4O95619 227 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 STAMBPO95630 424 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 TFRCP02786 760 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 VIMP08670 466 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 DHRS4L1P0CG22 281 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 TSPY4P0CV99 314 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 TSPY10P0CW01 314 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 CYP4B1P13584 511 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 GYS1P13807 737 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 ZNF24P17028 368 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 OAS2P29728 719 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 S100A5P33763 92 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 HSPA1LP34931 641 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 MAP2K2P36507 400 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 RPL3P39023 403 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 CDK7P50613 346 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 RPS6KA3P51812 740 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 MNAT1P51948 309 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 RBM5P52756 815 aaKnown RBP eCLIP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 CTAG1AP78358 180 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 ADORA2A-AS1P86434 159 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 LRRC74AQ0VAA2 488 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 ST3GAL1Q11201 340 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 COG2Q14746 738 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 ARHGEF6Q15052 776 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC14Q49A88 953 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 ACCSLQ4AC99 568 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 DCAF6Q58WW2 860 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 DNAJC21Q5F1R6 531 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 HHATQ5VTY9 493 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 IRGCQ6NXR0 463 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 KLHL24Q6TFL4 600 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SASS6Q6UVJ0 657 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 TUBA1AQ71U36 451 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 BRINP3Q76B58 766 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 GALNT7Q86SF2 657 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SCN4BQ8IWT1 228 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC65Q8IXS2 484 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC13Q8IYE1 715 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 PGBD5Q8N414 524 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms