RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 RNF225M0QZC1 329 aaPredicted RBP12.55□□□□□ -0.4
LSM6-204ENST00000504181 MAP3K6O95382 1288 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 PAEPP09466 180 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 XPAP23025 273 aaPredicted RBP12.55□□□□□ -0.4
LSM6-204ENST00000504181 KELP23276 732 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 PTK2Q05397 1052 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 FOXM1Q08050 763 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 ATXN7L2Q5T6C5 722 aaPredicted RBP12.55□□□□□ -0.4
LSM6-204ENST00000504181 RHOT1Q8IXI2 618 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 GRAMD1CQ8IYS0 662 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 DEFB106AQ8N104 65 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 OR2AP1Q8NGE2 309 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 CT55Q8WUE5 264 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 ISG20Q96AZ6 181 aaKnown RBP12.55□□□□□ -0.4
LSM6-204ENST00000504181 LGR4Q9BXB1 951 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 GSDMCQ9BYG8 508 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 ACTL8Q9H568 366 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 CARS2Q9HA77 564 aaKnown RBP12.55□□□□□ -0.4
LSM6-204ENST00000504181 PCDHGB7Q9Y5F8 929 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 PCDHGA6Q9Y5G7 932 aa12.55□□□□□ -0.4
LSM6-204ENST00000504181 ILVBLA1L0T0 632 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 E5RJQ4 531 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 TNFRSF10CO14798 259 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 KLRC4O43908 158 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 KIAA0754O94854 1291 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 POP4O95707 220 aaKnown RBP12.54□□□□□ -0.4
LSM6-204ENST00000504181 RECKO95980 971 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 GSRP00390 522 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 HNRNPH3P31942 346 aaKnown RBP12.54□□□□□ -0.4
LSM6-204ENST00000504181 PSMC2P35998 433 aaKnown RBP12.54□□□□□ -0.4
LSM6-204ENST00000504181 STAT1P42224 750 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 ACADSBP45954 432 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 RPL34P49207 117 aaKnown RBP12.54□□□□□ -0.4
LSM6-204ENST00000504181 RPS18P62269 152 aaKnown RBP12.54□□□□□ -0.4
LSM6-204ENST00000504181 SNRPD1P62314 119 aaKnown RBP12.54□□□□□ -0.4
LSM6-204ENST00000504181 ELP6Q0PNE2 266 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 ILF3Q12906 894 aaKnown RBP eCLIP12.54□□□□□ -0.4
LSM6-204ENST00000504181 RAPGEF1Q13905 1077 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 SLC39A14Q15043 492 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 POLD3Q15054 466 aaPredicted RBP12.54□□□□□ -0.4
LSM6-204ENST00000504181 STILQ15468 1287 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 TSR1Q2NL82 804 aaKnown RBP12.54□□□□□ -0.4
LSM6-204ENST00000504181 MYLK3Q32MK0 819 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 PLEKHN1Q494U1 663 aaPredicted RBP12.54□□□□□ -0.4
LSM6-204ENST00000504181 EFHC1Q5JVL4 640 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 PLPP6Q8IY26 295 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 ZNF683Q8IZ20 524 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 OR10G6Q8NH81 332 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 TMX3Q96JJ7 454 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 USP28Q96RU2 1077 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 RUFY1Q96T51 708 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 NUDT9Q9BW91 350 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 THAP9Q9H5L6 903 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 LATS2Q9NRM7 1088 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 EXOC1Q9NV70 894 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 COPG2Q9UBF2 871 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 TRAF3IP3Q9Y228 551 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 PCDHB4Q9Y5E5 795 aa12.54□□□□□ -0.4
LSM6-204ENST00000504181 GRAP2O75791 330 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 CCNYL3P0C7X3 344 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 GPD2P43304 727 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 LIG3P49916 1009 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 ENPEPQ07075 957 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 UGT8Q16880 541 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 CBWD6Q4V339 395 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 CBWD3Q5JTY5 395 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 CBWD5Q5RIA9 395 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 LEKR1Q6ZMV7 388 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 ZNF517Q6ZMY9 492 aaPredicted RBP12.53□□□□□ -0.4
LSM6-204ENST00000504181 RASGRP3Q8IV61 690 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 FDCSPQ8NFU4 85 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 THAP4Q8WY91 577 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 NCSTNQ92542 709 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 ELMO2Q96JJ3 720 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 MAGEF1Q9HAY2 307 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 ANLNQ9NQW6 1124 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 SIDT1Q9NXL6 827 aaKnown RBP12.53□□□□□ -0.4
LSM6-204ENST00000504181 LNPEPQ9UIQ6 1025 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 OSGIN2Q9Y236 505 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 ST14Q9Y5Y6 855 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 CACNA1CQ13936 2221 aa12.53□□□□□ -0.4
LSM6-204ENST00000504181 TRBV23OR9-2A0A075B6M9 112 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 A6NL46 340 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 DRGXA6NNA5 263 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 POLR2DO15514 142 aaKnown RBP12.52□□□□□ -0.41
LSM6-204ENST00000504181 TEX33O43247 280 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 CEACAM4O75871 244 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 NDUFA10O95299 355 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 COX6B1P14854 86 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 ACVRL1P37023 503 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 GARSP41250 739 aaKnown RBP12.52□□□□□ -0.41
LSM6-204ENST00000504181 PTGIRP43119 386 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 GNPDA1P46926 289 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 NASPP49321 788 aaPredicted RBP12.52□□□□□ -0.41
LSM6-204ENST00000504181 HDAC4P56524 1084 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 GNA12Q03113 381 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 MTA1Q13330 715 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 IL10RAQ13651 578 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 AGERQ15109 404 aa12.52□□□□□ -0.41
LSM6-204ENST00000504181 DENND1BQ6P3S1 775 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms