RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 DHX33Q9H6R0 707 aaKnown RBP16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 WFS1O76024 890 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 MMP3P08254 477 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 RPL5P46777 297 aaKnown RBP16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 CCR4P51679 360 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 USP46P62068 366 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 RFX4Q33E94 735 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 PARP15Q460N3 678 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 CERCAMQ5T4B2 595 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 ARHGAP36Q6ZRI8 547 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 FIBCD1Q8N539 461 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 SLC4A11Q8NBS3 891 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 B3GNT5Q9BYG0 378 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 RHBGQ9H310 441 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 PCDHB9Q9Y5E1 797 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 OR6B1O95007 311 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 CST1P01037 141 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 IL6P05231 212 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 CTPS1P17812 591 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 IRAK1BP1Q5VVH5 260 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 CNSTQ6PJW8 725 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 SCIMPQ6UWF3 145 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 CUZD1Q86UP6 607 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 VPS35Q96QK1 796 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 PANX1Q96RD7 426 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 PNPLA3Q9NST1 481 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 PACSIN3Q9UKS6 424 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 IKZF3Q9UKT9 509 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 R3HDM2Q9Y2K5 976 aaKnown RBP16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 URADA6NGE7 173 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 SCAMP3O14828 347 aaKnown RBP16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 SLC22A3O75751 556 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 JAM2P57087 298 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 GRM3Q14832 879 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 FAM46CQ5VWP2 391 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 MZT2AQ6P582 158 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 KIAA0408Q6ZU52 694 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 EFCAB3Q8N7B9 438 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 CXorf40BQ96DE9 158 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 HOPXQ9BPY8 73 aaPredicted RBP16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 IKZF4Q9H2S9 585 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 CAB39LQ9H9S4 337 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 H0YC42 278 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 ARL2P36404 184 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 ADARP55265 1226 aaKnown RBP16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 BIKQ13323 160 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 ZIK1Q3SY52 487 aaPredicted RBP16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 ZDHHC20Q5W0Z9 365 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 CES5AQ6NT32 575 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 ARMC8Q8IUR7 673 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 AMER2Q8N7J2 671 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 IRGQQ8WZA9 623 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 CLEC4MQ9H2X3 399 aaPredicted RBP16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 KIAA1522Q9P206 1035 aaPredicted RBP16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 CRNNQ9UBG3 495 aaPredicted RBP16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 ATP6AP2A0A1C7CYW4 349 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 ATP6AP2O75787 350 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 C2P06681 752 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 TRIM40Q6P9F5 258 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 PHF10Q8WUB8 498 aaKnown RBP16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 COL26A1Q96A83 441 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 LRCH4O75427 683 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 CDKN2BP42772 138 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 ABRQ12979 859 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 CPSF6Q16630 551 aaKnown RBP eCLIP16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 INTS6LQ5JSJ4 861 aaKnown RBP16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 COMMD2Q86X83 199 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 PLD5Q8N7P1 536 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 KLHL5Q96PQ7 755 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 SLC38A2Q96QD8 506 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 TTPALQ9BTX7 342 aa16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 COL14A1Q05707 1796 aaKnown RBP16.56■□□□□ 0.24
PCDHA1-203ENST00000504120 RFXANKO14593 260 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 RPP40O75818 363 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 PRKAR2AP13861 404 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 ARMC3Q5W041 872 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 RGMBQ6NW40 437 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 TMC5Q6UXY8 1006 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 SPATA19Q7Z5L4 167 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 TIFAQ96CG3 184 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 MYO19Q96H55 970 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 FAM84AQ96KN4 292 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 QKIQ96PU8 341 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 AGO3Q9H9G7 860 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 ATXN2Q99700 1313 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 CCDC189A1A4V9 331 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 NR2F1P10589 423 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 SULT2A1Q06520 285 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 USP4Q13107 963 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 COL9A3Q14050 684 aaPredicted RBP16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 LSM12Q3MHD2 195 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 OR52E6Q96RD3 313 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 ZNHIT2Q9UHR6 403 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 MAGEL2Q9UJ55 1249 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 SPATA2Q9UM82 520 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 SLC9A8Q9Y2E8 581 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 LOC100506127A0A0U1RQW1 187 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 GNRH1P01148 92 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 CDC25CP30307 473 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 ATP12AP54707 1039 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms