RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 CHADO15335 359 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 TGFB1I1O43294 461 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 GATCO43716 136 aaKnown RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 FZD6O60353 706 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 GRIN3BO60391 1043 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 PTP4A3O75365 173 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 CNTN5O94779 1100 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 VAPBO95292 243 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 SGPL1O95470 568 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 STAU1O95793 577 aaKnown RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 HPRP00739 348 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 CHRNA1P02708 482 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 NR3C2P08235 984 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 HOXD4P09016 255 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 GNAO1P09471 354 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 TMEM191BP0C7N4 346 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 PSKH1P11801 424 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 RAC2P15153 192 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 CYP11B1P15538 503 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ITGB6P18564 788 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 NELFEP18615 380 aaKnown RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 RAB3AP20336 220 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 MX2P20592 715 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 CYP3A7P24462 503 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 HTR1BP28222 390 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 MAPK1P28482 360 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 SOX11P35716 441 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 SERPINB5P36952 375 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 HSD17B2P37059 387 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 MAGEA6P43360 314 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 QARSP47897 775 aaKnown RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 PPM1FP49593 454 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 CASP4P49662 377 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 RAB25P57735 213 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ERVK-21P61565 698 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 UBXN2AP68543 259 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 NKX3-2P78367 333 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 MVKQ03426 396 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 TAP1Q03518 808 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 FAPQ12884 760 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 GRM1Q13255 1194 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 SP140Q13342 867 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 GALEQ14376 348 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ANGPT1Q15389 498 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 PSMD5Q16401 504 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 UGP2Q16851 508 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 MSS51Q4VC12 460 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 BRDTQ58F21 947 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 IGSF11Q5DX21 431 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 TOR2AQ5JU69 321 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 GNASQ5JWF2 1037 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 SULT1C3Q6IMI6 304 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 FAM45BPQ6NSW5 357 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 PMF1Q6P1K2 205 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 C8orf82Q6P1X6 216 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 PRMT9Q6P2P2 845 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 MOXD1Q6UVY6 613 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 LYPD8Q6UX82 237 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 USP50Q70EL3 339 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ENOSF1Q7L5Y1 443 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 SH3BP5LQ7L8J4 393 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 THAP5Q7Z6K1 395 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 RAB43Q86YS6 212 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 RNF135Q8IUD6 432 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 SLFN12Q8IYM2 578 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 MICU2Q8IYU8 434 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 TAGAPQ8N103 731 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 METTL4Q8N3J2 472 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 EFCAB3Q8N7B9 438 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 KCNH5Q8NCM2 988 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 TRPV3Q8NET8 790 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ST13P5Q8NFI4 369 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 VANGL1Q8TAA9 524 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 SLC22A8Q8TCC7 542 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 FAM45AQ8TCE6 357 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 SLC7A6Q92536 515 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 HTRA1Q92743 480 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 GPKOWQ92917 476 aaPredicted RBP eCLIP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 CLP1Q92989 425 aaKnown RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ZNF566Q969W8 418 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 NXPE3Q969Y0 559 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 C18orf25Q96B23 403 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 RCN3Q96D15 328 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ERLEC1Q96DZ1 483 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 C11orf24Q96F05 449 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ELMO2Q96JJ3 720 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ZFYVE19Q96K21 471 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 TSNARE1Q96NA8 513 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ZNF300Q96RE9 604 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 CITED4Q96RK1 184 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 WDR83Q9BRX9 315 aaKnown RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 WACQ9BTA9 647 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 BTBD2Q9BX70 525 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 MFRPQ9BY79 579 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ASPSCR1Q9BZE9 553 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 C6orf62Q9GZU0 229 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 TMEM206Q9H813 350 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ZNF395Q9H8N7 513 aaPredicted RBP5.99□□□□□ -1.45
LINC01340-201ENST00000504012 COG4Q9H9E3 785 aa5.99□□□□□ -1.45
LINC01340-201ENST00000504012 ZBTB26Q9HCK0 441 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms