RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 PCDH19Q8TAB3 1148 aa22.13■■□□□ 1.13
LSM6-203ENST00000503982 NAF1Q96HR8 494 aaKnown RBP22.13■■□□□ 1.13
LSM6-203ENST00000503982 NUDCD1Q96RS6 583 aa22.13■■□□□ 1.13
LSM6-203ENST00000503982 LGMNQ99538 433 aa22.13■■□□□ 1.13
LSM6-203ENST00000503982 SUDS3Q9H7L9 328 aaPredicted RBP22.13■■□□□ 1.13
LSM6-203ENST00000503982 B4GALT6Q9UBX8 382 aa22.13■■□□□ 1.13
LSM6-203ENST00000503982 CACNA1GO43497 2377 aa22.13■■□□□ 1.13
LSM6-203ENST00000503982 ITPR1Q14643 2758 aa22.13■■□□□ 1.13
LSM6-203ENST00000503982 EIF4E1BA6NMX2 242 aaKnown RBP22.12■■□□□ 1.13
LSM6-203ENST00000503982 CYP2A6P11509 494 aaPredicted RBP22.12■■□□□ 1.13
LSM6-203ENST00000503982 HOXB3P14651 431 aaPredicted RBP22.12■■□□□ 1.13
LSM6-203ENST00000503982 KELP23276 732 aa22.12■■□□□ 1.13
LSM6-203ENST00000503982 SLC25A11Q02978 314 aaKnown RBP22.12■■□□□ 1.13
LSM6-203ENST00000503982 MMRN1Q13201 1228 aa22.12■■□□□ 1.13
LSM6-203ENST00000503982 AGERQ15109 404 aa22.12■■□□□ 1.13
LSM6-203ENST00000503982 TBC1D25Q3MII6 688 aa22.12■■□□□ 1.13
LSM6-203ENST00000503982 RBM44Q6ZP01 1051 aaKnown RBP22.12■■□□□ 1.13
LSM6-203ENST00000503982 NUS1Q96E22 293 aa22.12■■□□□ 1.13
LSM6-203ENST00000503982 PDXPQ96GD0 296 aa22.12■■□□□ 1.13
LSM6-203ENST00000503982 CRELD1Q96HD1 420 aa22.12■■□□□ 1.13
LSM6-203ENST00000503982 CCDC3Q9BQI4 270 aa22.12■■□□□ 1.13
LSM6-203ENST00000503982 NOD2Q9HC29 1040 aa22.12■■□□□ 1.13
LSM6-203ENST00000503982 NT5MQ9NPB1 228 aa22.12■■□□□ 1.13
LSM6-203ENST00000503982 TTLL3Q9Y4R7 772 aa22.12■■□□□ 1.13
LSM6-203ENST00000503982 TRAFD1O14545 582 aaPredicted RBP22.11■■□□□ 1.13
LSM6-203ENST00000503982 MAFKO60675 156 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 SOCS5O75159 536 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 VIPR1P32241 457 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 ARHGEF7Q14155 803 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 SPIDRQ14159 915 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 ISXQ2M1V0 245 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 TAF8Q7Z7C8 310 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 LSMEM2Q8N112 164 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 PGBD5Q8N414 524 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.11■■□□□ 1.13
LSM6-203ENST00000503982 ARL10Q8N8L6 244 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 KCTD6Q8NC69 237 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 OR56A4Q8NGH8 313 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 CTNNBL1Q8WYA6 563 aaPredicted RBP22.11■■□□□ 1.13
LSM6-203ENST00000503982 FUBP1Q96AE4 644 aaKnown RBP22.11■■□□□ 1.13
LSM6-203ENST00000503982 TRIM5Q9C035 493 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 WDR26Q9H7D7 661 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 PHTF1Q9UMS5 762 aa22.11■■□□□ 1.13
LSM6-203ENST00000503982 CD48P09326 243 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 TPM1P09493 284 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 RBMS1P29558 406 aaKnown RBP22.1■■□□□ 1.13
LSM6-203ENST00000503982 KIAA1024LP59773 190 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 TBX2Q13207 712 aaPredicted RBP22.1■■□□□ 1.13
LSM6-203ENST00000503982 TSR1Q2NL82 804 aaKnown RBP22.1■■□□□ 1.13
LSM6-203ENST00000503982 ARMC12Q5T9G4 340 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 NYAP1Q6ZVC0 841 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 NDUFAF2Q8N183 169 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 KYQ8NBH2 561 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 SNIP1Q8TAD8 396 aaKnown RBP22.1■■□□□ 1.13
LSM6-203ENST00000503982 OR1E3Q8WZA6 343 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 NSMCE3Q96MG7 304 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 DNAJC7Q99615 494 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 MGME1Q9BQP7 344 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 POLR1BQ9H9Y6 1135 aa22.1■■□□□ 1.13
LSM6-203ENST00000503982 MRPL40Q9NQ50 206 aaKnown RBP22.1■■□□□ 1.13
LSM6-203ENST00000503982 ZNHIT6Q9NWK9 470 aaKnown RBP22.1■■□□□ 1.13
LSM6-203ENST00000503982 RCOR3Q9P2K3 495 aaPredicted RBP22.1■■□□□ 1.13
LSM6-203ENST00000503982 TMEM202A6NGA9 273 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 PDE2AO00408 941 aaPredicted RBP22.09■■□□□ 1.13
LSM6-203ENST00000503982 H2AFZP0C0S5 128 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 KRT10P13645 584 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 ZNF75DP51815 510 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 PCBP4P57723 403 aaKnown RBP22.09■■□□□ 1.13
LSM6-203ENST00000503982 TRAF2Q12933 501 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 PNCKQ6P2M8 343 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 LVRNQ6Q4G3 990 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 H2AFVQ71UI9 128 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 SDR16C5Q8N3Y7 309 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 WDR48Q8TAF3 677 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 ATXN7L3BQ96GX2 97 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 ZNF578Q96N58 590 aaPredicted RBP22.09■■□□□ 1.13
LSM6-203ENST00000503982 CYP4F12Q9HCS2 524 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 HAUS2Q9NVX0 235 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 SATB2Q9UPW6 733 aa22.09■■□□□ 1.13
LSM6-203ENST00000503982 HTRA2O43464 458 aaPredicted RBP22.08■■□□□ 1.13
LSM6-203ENST00000503982 MFSD11O43934 449 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 TCEA3O75764 348 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 MAP3K6O95382 1288 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 PEX11BO96011 259 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 CTPS1P17812 591 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 LSSP48449 732 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 EPHB1P54762 984 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 CNGA3Q16281 694 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 ATP13A4Q4VNC1 1196 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 RAET1GQ6H3X3 334 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 TIGD7Q6NT04 549 aaPredicted RBP22.08■■□□□ 1.13
LSM6-203ENST00000503982 USP45Q70EL2 814 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 MAP7D3Q8IWC1 876 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 ZNF248Q8NDW4 579 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 FAM46DQ8NEK8 389 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 CCDC74AQ96AQ1 378 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 SEMA3CQ99985 751 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 FGF22Q9HCT0 170 aa22.08■■□□□ 1.13
LSM6-203ENST00000503982 PHPT1Q9NRX4 125 aaPredicted RBP22.08■■□□□ 1.13
LSM6-203ENST00000503982 WDR70Q9NW82 654 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms