RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 FCF1Q9Y324 198 aaKnown RBP21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 MT-CO1P00395 513 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 EPHA5P54756 1037 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 RHOAP61586 193 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 TYSND1Q2T9J0 566 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 SPATA6LQ8N4H0 392 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 TTC16Q8NEE8 873 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 TTC8Q8TAM2 541 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 HERVK_113Q902F9 699 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 PTCD3Q96EY7 689 aaKnown RBP21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 TMEM237Q96Q45 408 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 SMIM14Q96QK8 99 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 TUBB6Q9BUF5 446 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 MRPL46Q9H2W6 279 aaKnown RBP21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 KLC4Q9NSK0 619 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 ARL8BQ9NVJ2 186 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 HCFC1R1Q9NWW0 138 aa21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 CORO1CQ9ULV4 474 aaPredicted RBP21.39■■□□□ 1.02
UBE2D3-216ENST00000503742 TLL1O43897 1013 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 FZD6O60353 706 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 DLX3O60479 287 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 HNRNPCL1O60812 293 aaKnown RBP21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 KPNA2P52292 529 aaKnown RBP21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 TUBB3Q13509 450 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 FAM45BPQ6NSW5 357 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 SHKBP1Q8TBC3 707 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 PHOSPHO2Q8TCD6 241 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 FAM45AQ8TCE6 357 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 POF1BQ8WVV4 589 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 ACDQ96AP0 544 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 C2orf49Q9BVC5 232 aaPredicted RBP21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 FAM96AQ9H5X1 160 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 CLEC4EQ9ULY5 219 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 SLC4A7Q9Y6M7 1214 aa21.39■■□□□ 1.01
UBE2D3-216ENST00000503742 C2orf81A6NN90 581 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 MGRN1O60291 552 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 KRT16P08779 473 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 RASSF2P50749 326 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 CDKN2DP55273 166 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 LMAN2Q12907 356 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 FAM83EQ2M2I3 478 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 ZNF549Q6P9A3 640 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 RTL10Q7L3V2 364 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 OR4K2Q8NGD2 314 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 FIBINQ8TAL6 211 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 DRC3Q9H069 523 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 DNAJC28Q9NX36 388 aa21.38■■□□□ 1.01
UBE2D3-216ENST00000503742 HSPA4LO95757 839 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 SLC26A3P40879 764 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 STC1P52823 247 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 CSHL1Q14406 222 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 TECRLQ5HYJ1 363 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 AGAP9Q5VTM2 703 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 RETSATQ6NUM9 610 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 ZNF781Q8N8C0 355 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 SCG3Q8WXD2 468 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 NSL1Q96IY1 281 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 SMG9Q9H0W8 520 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 GPAMQ9HCL2 828 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 TLR9Q9NR96 1032 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 PLK2Q9NYY3 685 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 CRYL1Q9Y2S2 319 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 CAPN14A8MX76 684 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 K7ERQ8 282 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 CCDC22O60826 627 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 MOSPD3O75425 235 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 CSPG5O95196 566 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 SERPINA6P08185 405 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 LTA4HP09960 611 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 HOXB8P17481 243 aaPredicted RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 EN2P19622 333 aaPredicted RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 LPOP22079 712 aaPredicted RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 FDXRP22570 491 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 SLC8A1P32418 973 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 GRIA4P48058 902 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 TIAL1Q01085 375 aaKnown RBP eCLIP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 ATXN7L2Q5T6C5 722 aaPredicted RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 AFTPHQ6ULP2 937 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 TMEM207Q6UWW9 146 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 TPGS1Q6ZTW0 290 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 SDCCAG8Q86SQ7 713 aaPredicted RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 TTC30BQ8N4P2 665 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 ANKRD49Q8WVL7 239 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 UTP4Q969X6 686 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 LMLNQ96KR4 655 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 UNKQ9C0B0 810 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 CDH19Q9H159 772 aa21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 INTS10Q9NVR2 710 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 KIAA1522Q9P206 1035 aaPredicted RBP21.37■■□□□ 1.01
UBE2D3-216ENST00000503742 CCDC166P0CW27 439 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 HNRNPH1P31943 449 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 PLK1P53350 603 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 AP1S1P61966 158 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 SPNS2Q8IVW8 549 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 SH3RF2Q8TEC5 729 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 TCEAL4Q96EI5 215 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 SMAD6O43541 496 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 RFPL2O75678 378 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 DDX6P26196 483 aaKnown RBP eCLIP21.36■■□□□ 1.013e-8■□□□□ 10.6
UBE2D3-216ENST00000503742 PTPN4P29074 926 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms