RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 TNIP2Q8NFZ5 429 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 DQX1Q8TE96 717 aaKnown RBP24.57■■□□□ 1.52
DDX41-202ENST00000503078 ISOC1Q96CN7 298 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 HOPXQ9BPY8 73 aaPredicted RBP24.57■■□□□ 1.52
DDX41-202ENST00000503078 ABCD2Q9UBJ2 740 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 AURKCQ9UQB9 309 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 TIMM13Q9Y5L4 95 aaPredicted RBP24.57■■□□□ 1.52
DDX41-202ENST00000503078 MBLAC1A4D2B0 266 aaPredicted RBP24.57■■□□□ 1.52
DDX41-202ENST00000503078 TSPAN8P19075 237 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 ATP6V0D1P61421 351 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 ZNF678Q5SXM1 525 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 TMEM86AQ8N2M4 240 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 BBS5Q8N3I7 341 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 LZTR1Q8N653 840 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 GPRC5AQ8NFJ5 357 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 GABPB2Q8TAK5 448 aaPredicted RBP24.57■■□□□ 1.52
DDX41-202ENST00000503078 ADAMTS16Q8TE57 1224 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 L3HYPDHQ96EM0 354 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 HSPBAP1Q96EW2 488 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 SMARCD1Q96GM5 515 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 C3orf30Q96M34 536 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 ZFP42Q96MM3 310 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 OSBPL6Q9BZF3 934 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 PLGRKTQ9HBL7 147 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 MAP10Q9P2G4 905 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 A0A0J9YYE9 177 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 DHRS12A0PJE2 317 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 ZNF701M0R085 212 aaPredicted RBP24.56■■□□□ 1.52
DDX41-202ENST00000503078 GNAO1P09471 354 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 INPP5AQ14642 412 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 KIF19Q2TAC6 998 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 PRMT9Q6P2P2 845 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 EPHX4Q8IUS5 362 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 UPF1Q92900 1129 aaKnown RBP eCLIP24.56■■□□□ 1.52
DDX41-202ENST00000503078 LRCH3Q96II8 777 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 ADI1Q9BV57 179 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 TSPYL2Q9H2G4 693 aaPredicted RBP24.56■■□□□ 1.52
DDX41-202ENST00000503078 TBC1D13Q9NVG8 400 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 EBF1Q9UH73 591 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 SFMBT1Q9UHJ3 866 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 STT3AP46977 705 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 ZNF467Q7Z7K2 595 aaPredicted RBP24.56■■□□□ 1.52
DDX41-202ENST00000503078 GPR180Q86V85 440 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 ALG9Q9H6U8 611 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 AKTIPQ9H8T0 292 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 AGPAT4Q9NRZ5 378 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 VWA7Q9Y334 891 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 NDUFAF1Q9Y375 327 aa24.56■■□□□ 1.52
DDX41-202ENST00000503078 PLXNB2O15031 1838 aa24.55■■□□□ 1.52
DDX41-202ENST00000503078 NR5A2O00482 541 aa24.55■■□□□ 1.52
DDX41-202ENST00000503078 MERTKQ12866 999 aa24.55■■□□□ 1.52
DDX41-202ENST00000503078 UGT3A2Q3SY77 523 aa24.55■■□□□ 1.52
DDX41-202ENST00000503078 NOMO2Q5JPE7 1267 aa24.55■■□□□ 1.52
DDX41-202ENST00000503078 SPPL2CQ8IUH8 684 aa24.55■■□□□ 1.52
DDX41-202ENST00000503078 IL1RL2Q9HB29 575 aa24.55■■□□□ 1.52
DDX41-202ENST00000503078 ZNHIT2Q9UHR6 403 aa24.55■■□□□ 1.52
DDX41-202ENST00000503078 CDH9Q9ULB4 789 aa24.55■■□□□ 1.52
DDX41-202ENST00000503078 FGF10O15520 208 aaPredicted RBP24.54■■□□□ 1.52
DDX41-202ENST00000503078 IL10P22301 178 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 PCSK7Q16549 785 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 UNC50Q53HI1 259 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 C9orf131Q5VYM1 1079 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 TIGD7Q6NT04 549 aaPredicted RBP24.54■■□□□ 1.52
DDX41-202ENST00000503078 CLYBLQ8N0X4 340 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 CATSPERBQ9H7T0 1116 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 CROCCQ5TZA2 2017 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 TRIM64A6NGJ6 449 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 MAGEB3O15480 346 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 HSD17B1P14061 328 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 HOXC13P31276 330 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 KCNC1P48547 511 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 WNT3AP56704 352 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 BNIP2Q12982 314 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 DUS1LQ6P1R4 473 aaKnown RBP24.54■■□□□ 1.52
DDX41-202ENST00000503078 MINDY1Q8N5J2 469 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 GOLM1Q8NBJ4 401 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 C12orf43Q96C57 262 aaKnown RBP24.54■■□□□ 1.52
DDX41-202ENST00000503078 SLC45A3Q96JT2 553 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 CSNK1G1Q9HCP0 422 aa24.54■■□□□ 1.52
DDX41-202ENST00000503078 FAM149AA5PLN7 773 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 UGT1A6P19224 532 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 FASP25445 335 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 PSMA4P25789 261 aaKnown RBP24.53■■□□□ 1.52
DDX41-202ENST00000503078 GPR158Q5T848 1215 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 LCN8Q6JVE9 175 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 TMEM207Q6UWW9 146 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 ISCA2Q86U28 154 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 SLC15A3Q8IY34 581 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 FEM1CQ96JP0 617 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 C9orf16Q9BUW7 83 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 NDFIP2Q9NV92 336 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 COL4A4P53420 1690 aaPredicted RBP24.53■■□□□ 1.52
DDX41-202ENST00000503078 WISP3O95389 354 aaPredicted RBP24.53■■□□□ 1.52
DDX41-202ENST00000503078 IGLV3-25P01717 112 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 IMPDH2P12268 514 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 ENTPD1P49961 510 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 SLC36A3Q495N2 470 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 USP50Q70EL3 339 aaPredicted RBP24.53■■□□□ 1.52
DDX41-202ENST00000503078 GALNT7Q86SF2 657 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 CILP2Q8IUL8 1156 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms