RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 ADAMDEC1O15204 470 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 PRPF4O43172 522 aaKnown RBP eCLIP4.76□□□□□ -1.65
RFC1-205ENST00000502991 PAPSS1O43252 624 aaPredicted RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 SPRY2O43597 315 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 SOCS5O75159 536 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 ALDOAP04075 364 aaKnown RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 GALTP07902 379 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 ERCC2P18074 760 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 CASTP20810 708 aaKnown RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 IL10P22301 178 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 MMP8P22894 467 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 FMO4P31512 558 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 PEX19P40855 299 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 ARHGAP25P42331 645 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 RPS6KA3P51812 740 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 PNLIPRP2P54317 469 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 CSE1LP55060 971 aaKnown RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 GRAPQ13588 217 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 ITGA7Q13683 1181 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 BYSLQ13895 437 aaKnown RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 IL11RAQ14626 422 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 EZH2Q15910 746 aaKnown RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 FAM187BQ17R55 369 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 NAPEPLDQ6IQ20 393 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 GRHL2Q6ISB3 625 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 SLC18B1Q6NT16 456 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 WDR93Q6P2C0 686 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 C17orf99Q6UX52 265 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 GLDNQ6ZMI3 551 aaPredicted RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 MSANTD1Q6ZTZ1 278 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 BCDIN3DQ7Z5W3 292 aaKnown RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.76□□□□□ -1.65
RFC1-205ENST00000502991 ZNF540Q8NDQ6 660 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 CTCFLQ8NI51 663 aaPredicted RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 ZFAND2BQ8WV99 257 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 KCNJ9Q92806 393 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 MMABQ96EY8 250 aaPredicted RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 RBM18Q96H35 190 aaKnown RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 C16orf45Q96MC5 204 aaPredicted RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 SNX18Q96RF0 628 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 SRSF8Q9BRL6 282 aaKnown RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 MLPHQ9BV36 600 aaPredicted RBP4.76□□□□□ -1.65
RFC1-205ENST00000502991 KIFC3Q9BVG8 833 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 HEMGNQ9BXL5 484 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 OSGEPL1Q9H4B0 414 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 C20orf141Q9NUB4 165 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 ASIC5Q9NY37 505 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 MTMR4Q9NYA4 1195 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 OGFRQ9NZT2 677 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 HDAC6Q9UBN7 1215 aa4.76□□□□□ -1.65
RFC1-205ENST00000502991 LRRC53A6NM62 1247 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 OR6C76A6NM76 312 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 A8MVJ9 347 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 PPP6CO00743 305 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 DIAPH2O60879 1101 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 SEC31AO94979 1220 aaKnown RBP4.75□□□□□ -1.65
RFC1-205ENST00000502991 SIX3O95343 332 aaPredicted RBP4.75□□□□□ -1.65
RFC1-205ENST00000502991 GCNT3O95395 438 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 CYP4B1P13584 511 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 TRIM21P19474 475 aaKnown RBP4.75□□□□□ -1.65
RFC1-205ENST00000502991 SFPQP23246 707 aaKnown RBP eCLIP4.75□□□□□ -1.65
RFC1-205ENST00000502991 KELP23276 732 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 DIO1P49895 249 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 GPC3P51654 580 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 CCR3P51677 355 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 COPB1P53618 953 aaKnown RBP4.75□□□□□ -1.65
RFC1-205ENST00000502991 TUBB4BP68371 445 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 LMAN2Q12907 356 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 HNRNPA0Q13151 305 aaKnown RBP4.75□□□□□ -1.65
RFC1-205ENST00000502991 ALKBH1Q13686 389 aaKnown RBP4.75□□□□□ -1.65
RFC1-205ENST00000502991 KLF9Q13886 244 aaPredicted RBP4.75□□□□□ -1.65
RFC1-205ENST00000502991 TRIM29Q14134 588 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 SLC18A3Q16572 532 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 WSCD2Q2TBF2 565 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 KRT79Q5XKE5 535 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 ATG9BQ674R7 924 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 ACSM6Q6P461 480 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 CNGA4Q8IV77 575 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 SIX6OS1Q8N1H7 587 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 ENDOVQ8N8Q3 282 aaKnown RBP4.75□□□□□ -1.65
RFC1-205ENST00000502991 C8orf58Q8NAV2 365 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 ANKRD20A12PQ8NF67 263 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 SPATA18Q8TC71 538 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 PSPC1Q8WXF1 523 aaKnown RBP4.75□□□□□ -1.65
RFC1-205ENST00000502991 CORO2AQ92828 525 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 GTF3C6Q969F1 213 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 CTHRC1Q96CG8 243 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 BICD1Q96G01 975 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 PAFAH2Q99487 392 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 TASP1Q9H6P5 420 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 CHCHD3Q9NX63 227 aaKnown RBP4.75□□□□□ -1.65
RFC1-205ENST00000502991 KLHL13Q9P2N7 655 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 HOOK1Q9UJC3 728 aaKnown RBP4.75□□□□□ -1.65
RFC1-205ENST00000502991 DUSP12Q9UNI6 340 aa4.75□□□□□ -1.65
RFC1-205ENST00000502991 CACNA1IQ9P0X4 2223 aa4.74□□□□□ -1.65
RFC1-205ENST00000502991 ZNF644Q9H582 1327 aaPredicted RBP4.74□□□□□ -1.65
RFC1-205ENST00000502991 SYNRGQ9UMZ2 1314 aa4.74□□□□□ -1.65
RFC1-205ENST00000502991 LOC102723996A0A087X1L8 192 aa4.74□□□□□ -1.65
RFC1-205ENST00000502991 SMIM35A0A1B0GVV1 85 aa4.74□□□□□ -1.65
RFC1-205ENST00000502991 FAM90A8PA6NJQ4 464 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms