RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 TMEM202A6NGA9 273 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 LGALS16A8MUM7 142 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 J3KR12 359 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 EPHB6O15197 1021 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 INSIG1O15503 277 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 CREB3O43889 395 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 PIGNO95427 931 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 CELA2BP08218 269 aaPredicted RBP6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 ELFN1P0C7U0 828 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 JMJD7P0C870 316 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 CCNB1P14635 433 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 GM2AP17900 193 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 ITIH2P19823 946 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 CES1P23141 567 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 PCK1P35558 622 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 FASLGP48023 281 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 RPL7AP62424 266 aaKnown RBP6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 GPLD1P80108 840 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 BCL2L1Q07817 233 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 LRP8Q14114 963 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 ARHGEF7Q14155 803 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 SDK2Q58EX2 2172 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 CFAP58Q5T655 872 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 DCUN1D2Q6PH85 259 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 RFX8Q6ZV50 586 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 USP53Q70EK8 1073 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 APTXQ7Z2E3 356 aaKnown RBP6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 IRF2BP2Q7Z5L9 587 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 PIM3Q86V86 326 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 ZSWIM9Q86XI8 627 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 ZNF354CQ86Y25 554 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 CAMK1DQ8IU85 385 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 LRRC49Q8IUZ0 686 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 PYROXD2Q8N2H3 581 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 TSEN2Q8NCE0 465 aaKnown RBP6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 CCDC112Q8NEF3 446 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 FAM46DQ8NEK8 389 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 NEK11Q8NG66 645 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 OR4D9Q8NGE8 314 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 OR1E3Q8WZA6 343 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 FATE1Q969F0 183 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 SCRN2Q96FV2 425 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 PDXPQ96GD0 296 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 COQ10AQ96MF6 247 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 MCEEQ96PE7 176 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 MCCC1Q96RQ3 725 aaPredicted RBP6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 DDA1Q9BW61 102 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 GSDMCQ9BYG8 508 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 ASPSCR1Q9BZE9 553 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 SLC39A8Q9C0K1 460 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 VPS16Q9H269 839 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 WDR26Q9H7D7 661 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 EPB41L5Q9HCM4 733 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 FGF22Q9HCT0 170 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 PHPT1Q9NRX4 125 aaPredicted RBP6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 FAM207AQ9NSI2 230 aaPredicted RBP6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 GEMIN8Q9NWZ8 242 aaKnown RBP6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 AKAP7Q9P0M2 348 aaPredicted RBP6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 LRIT1Q9P2V4 623 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 GULP1Q9UBP9 304 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 SEPT3Q9UH03 358 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 AMACRQ9UHK6 382 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 PHTF1Q9UMS5 762 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 SLC17A4Q9Y2C5 497 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 LOXL2Q9Y4K0 774 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 OR1A2Q9Y585 309 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 TENM4Q6N022 2769 aa6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 FLNBO75369 2602 aaKnown RBP6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 PMS2P1A4D2B8 440 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 TMEM191CA6NGB0 347 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 B4E171 279 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 C9orf172C9J069 976 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 STMND1H3BQB6 276 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 EEF2KO00418 725 aaKnown RBP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 PES1O00541 588 aaKnown RBP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 SUV39H1O43463 412 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 B4GAT1O43505 415 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 SLC28A2O43868 658 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 PPFIA2O75334 1257 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 RNF8O76064 485 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 PEX11BO96011 259 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 CEACAM5P06731 702 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 IVLP07476 585 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 MYBL1P10243 752 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 CYP2A6P11509 494 aaPredicted RBP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 ZNF30P17039 623 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 ERCC2P18074 760 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 TSPAN7P41732 249 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 PRKCIP41743 596 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 RGRP47804 291 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 PAPOLAP51003 745 aaKnown RBP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 COPB1P53618 953 aaKnown RBP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 LIMK2P53671 638 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 CDH6P55285 790 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 RAB15P59190 212 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 OGDHQ02218 1023 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 ILF3Q12906 894 aaKnown RBP eCLIP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 MAMLD1Q13495 774 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 DPYSQ14117 519 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 DPYSL2Q16555 572 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms