RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 TMC6Q7Z403 805 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 PTAR1Q7Z6K3 402 aaPredicted RBP8.06□□□□□ -1.12
PUDP-205ENST00000498474 SLFN11Q7Z7L1 901 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 PHF13Q86YI8 300 aaPredicted RBP8.06□□□□□ -1.12
PUDP-205ENST00000498474 CCNJLQ8IV13 435 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 MCOLN2Q8IZK6 566 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 PCDH20Q8N6Y1 951 aaKnown RBP8.06□□□□□ -1.12
PUDP-205ENST00000498474 TMEM145Q8NBT3 493 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 C3orf20Q8ND61 904 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 ANKRD20A12PQ8NF67 263 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 HNRNPLLQ8WVV9 542 aaKnown RBP8.06□□□□□ -1.12
PUDP-205ENST00000498474 HMCESQ96FZ2 354 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 CRELD1Q96HD1 420 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 CELF6Q96J87 481 aaKnown RBP8.06□□□□□ -1.12
PUDP-205ENST00000498474 EXOC2Q96KP1 924 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 CCDC114Q96M63 670 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 KLHL32Q96NJ5 620 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 NAP1L5Q96NT1 182 aaPredicted RBP8.06□□□□□ -1.12
PUDP-205ENST00000498474 HDAC8Q9BY41 377 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 SLC17A9Q9BYT1 436 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 OSBPL2Q9H1P3 480 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 CCDC86Q9H6F5 360 aaKnown RBP8.06□□□□□ -1.12
PUDP-205ENST00000498474 PREBQ9HCU5 417 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 FZD10Q9ULW2 581 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 COQ6Q9Y2Z9 468 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 RNF114Q9Y508 228 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 FADS3Q9Y5Q0 445 aa8.06□□□□□ -1.12
PUDP-205ENST00000498474 MGAQ8IWI9 3026 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 LRRC53A6NM62 1247 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 J3KR12 359 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 CASC3O15234 703 aaKnown RBP8.05□□□□□ -1.12
PUDP-205ENST00000498474 BUB1O43683 1085 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 KDELR3O43731 214 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 DFNA5O60443 496 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 RAMP2O60895 175 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 RFPL3O75679 317 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 TMCC1O94876 653 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 PRKCGP05129 697 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 TNFAIP3P21580 790 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 HNRNPA2B1P22626 353 aaKnown RBP8.05□□□□□ -1.12
PUDP-205ENST00000498474 DGKAP23743 735 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 EPHB2P29323 1055 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 AKT2P31751 481 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 MAPKAPK2P49137 400 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 ARRB1P49407 418 aaPredicted RBP8.05□□□□□ -1.12
PUDP-205ENST00000498474 NEK3P51956 506 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 GSCP56915 257 aaPredicted RBP8.05□□□□□ -1.12
PUDP-205ENST00000498474 TCEA2Q15560 299 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 COL28A1Q2UY09 1125 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 MYLK3Q32MK0 819 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 HES3Q5TGS1 186 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 SFMBT2Q5VUG0 894 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 ACAD10Q6JQN1 1059 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 CAVIN1Q6NZI2 390 aaKnown RBP8.05□□□□□ -1.12
PUDP-205ENST00000498474 ZNF783Q6ZMS7 281 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 Q6ZSR6 202 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 ZNF571Q7Z3V5 609 aaPredicted RBP8.05□□□□□ -1.12
PUDP-205ENST00000498474 TP53INP2Q8IXH6 220 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 ARFGAP1Q8N6T3 406 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 GIMAP7Q8NHV1 300 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 PEBP4Q96S96 227 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 SYT11Q9BT88 431 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 CEP44Q9C0F1 390 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 TCEAL2Q9H3H9 227 aaPredicted RBP8.05□□□□□ -1.12
PUDP-205ENST00000498474 HAUS4Q9H6D7 363 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 ERVMER34-1Q9H9K5 563 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 LIN7BQ9HAP6 207 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 DNAJC28Q9NX36 388 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 PCSK1NQ9UHG2 260 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 DMTF1Q9Y222 760 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 ACTL7BQ9Y614 415 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 IGSF10Q6WRI0 2623 aa8.05□□□□□ -1.12
PUDP-205ENST00000498474 RASA4BC9J798 803 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 GOLGA6L22H0YM25 854 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 NEMP1O14524 444 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 SCAMP1O15126 338 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 RASA4O43374 803 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 PIGNO95427 931 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 GIMD1P0DJR0 217 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 JUPP14923 745 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 FERP16591 822 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 ETFBP38117 255 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 ZNF143P52747 638 aaPredicted RBP8.04□□□□□ -1.12
PUDP-205ENST00000498474 SLC20A2Q08357 652 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 TARDBPQ13148 414 aaKnown RBP eCLIP8.04□□□□□ -1.12
PUDP-205ENST00000498474 FZD2Q14332 565 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 CYTH1Q15438 398 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 INAVAQ3KP66 663 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 DCUN1D2Q6PH85 259 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 ARHGAP36Q6ZRI8 547 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 IQCHQ86VS3 1027 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 GALNT12Q8IXK2 581 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 RTL3Q8N8U3 475 aaKnown RBP8.04□□□□□ -1.12
PUDP-205ENST00000498474 OR2AP1Q8NGE2 309 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 NTAN1Q96AB6 310 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 PPP1R16AQ96I34 528 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 FEM1CQ96JP0 617 aa8.04□□□□□ -1.12
PUDP-205ENST00000498474 KLF6Q99612 283 aaPredicted RBP8.04□□□□□ -1.12
PUDP-205ENST00000498474 WRAP53Q9BUR4 548 aaKnown RBP8.04□□□□□ -1.12
PUDP-205ENST00000498474 MAGEH1Q9H213 219 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 491 ms