RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 PLD5Q8N7P1 536 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 ATP6V0D2Q8N8Y2 350 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 KYQ8NBH2 561 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 STKLD1Q8NE28 680 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 PCDH19Q8TAB3 1148 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF461Q8TAF7 563 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 SPPL3Q8TCT6 385 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 DQX1Q8TE96 717 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 OVCA2Q8WZ82 227 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 FBXO32Q969P5 355 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 LCORQ96JN0 433 aaPredicted RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 B3GALT6Q96L58 329 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CSPG4P5Q96PW8 444 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 HAPLN3Q96S86 360 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 FAM118BQ9BPY3 351 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CLSTN3Q9BQT9 956 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 BRD8Q9H0E9 1235 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 TKTL2Q9H0I9 626 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 RAB6CQ9H0N0 254 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 OSBPL2Q9H1P3 480 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 POMKQ9H5K3 350 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 PCDH9Q9HC56 1237 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 GP6Q9HCN6 339 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CD248Q9HCU0 757 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 WDR6Q9NNW5 1121 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 ZDHHC18Q9NUE0 388 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 DONSONQ9NYP3 566 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CWC15Q9P013 229 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 DLGAP2Q9P1A6 1054 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 FNIP2Q9P278 1114 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 UXTQ9UBK9 157 aaPredicted RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 FBLN5Q9UBX5 448 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 SF3B6Q9Y3B4 125 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 HEY1Q9Y5J3 304 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 MRPL42Q9Y6G3 142 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 PTPRDP23468 1912 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 LOC400499M0QZD8 3231 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 PATJQ8NI35 1801 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 VWA8A3KMH1 1905 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 WDR27A2RRH5 827 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 GOLGA6BA6NDN3 693 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC38A8A6NNN8 435 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 PRRG1O14668 218 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 PPP1R12AO14974 1030 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 IRAK2O43187 625 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 FGF18O76093 207 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 STK10O94804 968 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 IGLV3-25P01717 112 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 APOEP02649 317 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 FAM153BP0C7A2 387 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 RARGP13631 454 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 PECAM1P16284 738 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 GOT1P17174 413 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 RPL17P18621 184 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 IVDP26440 423 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 KLRC2P26717 231 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 ECHS1P30084 290 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 GPR15P49685 360 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 VPS41P49754 854 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 ITGA8P53708 1063 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 PMS2P54278 862 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 EIF3BP55884 814 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TBX4P57082 545 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TPI1P60174 286 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 PITX1P78337 314 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 COG7P83436 770 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 POU4F1Q01851 419 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TAF10Q12962 218 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 GPS1Q13098 491 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 EIF4EBP2Q13542 120 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 KCNC3Q14003 757 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 VEPH1Q14D04 833 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 MORF4L2Q15014 288 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 PAFAH1B3Q15102 231 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 PDK1Q15118 436 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TRADDQ15628 312 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TRIP13Q15645 432 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 CCDC6Q16204 474 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 P3H1Q32P28 736 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 FAM153CQ494X1 144 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC45A4Q5BKX6 768 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 SDHAF4Q5VUM1 108 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 OTUD1Q5VV17 481 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 IZUMO3Q5VZ72 239 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 HEATR6Q6AI08 1181 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 ANKRD54Q6NXT1 300 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 NPNTQ6UXI9 565 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 LRIG3Q6UXM1 1119 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 RSPO2Q6UXX9 243 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 LRRC31Q6UY01 552 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 PPP1R21Q6ZMI0 780 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 RFX8Q6ZV50 586 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TRMT10CQ7L0Y3 403 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 SCD5Q86SK9 330 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TAC4Q86UU9 113 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 ZC3H18Q86VM9 953 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 TMEM173Q86WV6 379 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 C1orf210Q8IVY1 113 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 PPIL6Q8IXY8 311 aa5.41□□□□□ -1.54
HMGXB4-208ENST00000498325 VPS52Q8N1B4 723 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms