RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 HUNKP57058 714 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 RIPK4P57078 832 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ADAM17P78536 824 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 KDSRQ06136 332 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MFGE8Q08431 387 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 DMTNQ08495 405 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PTGISQ16647 500 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MST1LQ2TV78 715 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CEP78Q5JTW2 689 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 METTL24Q5JXM2 366 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 OTUD1Q5VV17 481 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 PLPP4Q5VZY2 271 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 NSMFQ6X4W1 530 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 C16orf86Q6ZW13 317 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MRGPREQ86SM8 312 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 GPAT4Q86UL3 456 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SLC25A42Q86VD7 318 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SFR1Q86XK3 245 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CATSPER3Q86XQ3 398 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 DZIP1LQ8IYY4 767 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 APCDD1Q8J025 514 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ABRAQ8N0Z2 381 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 POU5F2Q8N7G0 328 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PIK3C3Q8NEB9 887 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 OR2T6Q8NHC8 308 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 FBXO25Q8TCJ0 367 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MGARPQ8TDB4 240 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ZDHHC1Q8WTX9 485 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CA5BP1Q8WTZ4 195 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 BCL7CQ8WUZ0 217 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 TWIST2Q8WVJ9 160 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 EXT2Q93063 718 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 GAL3ST3Q96A11 431 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 DCPSQ96C86 337 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 OMA1Q96E52 524 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 HES6Q96HZ4 224 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 COG3Q96JB2 828 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 COL21A1Q96P44 957 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SIGLEC12Q96PQ1 595 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 RHNO1Q9BSD3 238 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 EFHD1Q9BUP0 239 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 BCL2L14Q9BZR8 327 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SMOC2Q9H3U7 446 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TRPV4Q9HBA0 871 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 B3GAT2Q9NPZ5 323 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MKS1Q9NXB0 559 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 VPS18Q9P253 973 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TJP2Q9UDY2 1190 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 EPHA6Q9UF33 1036 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 DDX19BQ9UMR2 479 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ANKRD6Q9Y2G4 727 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 NR2E1Q9Y466 385 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PCDHB7Q9Y5E2 793 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 IGKV3D-15A0A087WSY6 115 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 IGKV1-6A0A0C4DH72 117 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 A0A0G2JRQ6 117 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MTMR11A4FU01 709 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ZNF860A6NHJ4 632 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 HNRNPCL3B7ZW38 293 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 NR5A2O00482 541 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SH2B2O14492 632 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 DCLK1O15075 740 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TGOLN2O43493 480 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 GABARAPO95166 117 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CFBP00751 764 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PDGFAP04085 211 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PRNPP04156 253 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CYP2E1P05181 493 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 RHOP08100 348 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 RBP1P09455 135 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 FTH1P19P0C7X4 201 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 HNRNPCL4P0DMR1 293 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PFKLP17858 780 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 NTSP30990 170 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 GABRA3P34903 492 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 DDOSTP39656 456 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TMPOP42166 694 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 NKX2-1P43699 371 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 ARRB1P49407 418 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 PLTPP55058 493 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 GSDMDP57764 484 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TEKQ02763 1124 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 FAAP100Q0VG06 881 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 UNC119Q13432 240 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CAMK2DQ13557 499 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 DAG1Q14118 895 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SNX17Q15036 470 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ATP2B3Q16720 1220 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SLC45A4Q5BKX6 768 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SPATA1Q5VX52 437 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TMEM268Q5VZI3 342 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ZNF425Q6IV72 752 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 OGFOD3Q6PK18 319 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 P4HA3Q7Z4N8 544 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SETD3Q86TU7 594 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 FAM83AQ86UY5 434 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 RHPN2Q8IUC4 686 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 FBXL14Q8N1E6 418 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PDPRQ8NCN5 879 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CCDC197Q8NCU1 140 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms