RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 ZC3H18Q86VM9 953 aaKnown RBP11.3□□□□□ -0.6
ERCC8-208ENST00000497892 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.3□□□□□ -0.6
ERCC8-208ENST00000497892 ACTL9Q8TC94 416 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 PDCD6IPQ8WUM4 868 aaKnown RBP11.3□□□□□ -0.6
ERCC8-208ENST00000497892 LENG8Q96PV6 779 aaPredicted RBP11.3□□□□□ -0.6
ERCC8-208ENST00000497892 ALS2CR12Q96Q35 445 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 MCCC1Q96RQ3 725 aaPredicted RBP11.3□□□□□ -0.6
ERCC8-208ENST00000497892 KCNF1Q9H3M0 494 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 GAREM1Q9H706 876 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 SEPT10Q9P0V9 454 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 CA5BQ9Y2D0 317 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 FNDC3AQ9Y2H6 1198 aaKnown RBP11.3□□□□□ -0.6
ERCC8-208ENST00000497892 CABIN1Q9Y6J0 2220 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 A6NNZ2 444 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 H0Y8X5 98 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 MAGEC1O60732 1142 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 OPHN1O60890 802 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 MMP2P08253 660 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 PDHA1P08559 390 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 C6P13671 934 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 CA4P22748 312 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 NFKBIAP25963 317 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 PTPN3P26045 913 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 LIG3P49916 1009 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 CLDN2P57739 230 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 RPL26P61254 145 aaKnown RBP11.29□□□□□ -0.6
ERCC8-208ENST00000497892 FAM193AP78312 1265 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 SKOR1P84550 965 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 OTUD4Q01804 1114 aaKnown RBP11.29□□□□□ -0.6
ERCC8-208ENST00000497892 SEMG2Q02383 582 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 WASHC5Q12768 1159 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 SLC14A1Q13336 389 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 KLF1Q13351 362 aaPredicted RBP11.29□□□□□ -0.6
ERCC8-208ENST00000497892 AGERQ15109 404 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 SLC14A2Q15849 920 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 UAP1L1Q3KQV9 507 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 TEX44Q53QW1 395 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 MEI1Q5TIA1 1274 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 USP45Q70EL2 814 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 SPATS2Q86XZ4 545 aaKnown RBP11.29□□□□□ -0.6
ERCC8-208ENST00000497892 TRIM58Q8NG06 486 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 FAM174AQ8TBP5 190 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 PIH1D2Q8WWB5 315 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 HTR3CQ8WXA8 447 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 CENPTQ96BT3 561 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 SCRN2Q96FV2 425 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 IMP4Q96G21 291 aaKnown RBP11.29□□□□□ -0.6
ERCC8-208ENST00000497892 TEKT5Q96M29 485 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 C1QTNF7Q9BXJ2 289 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 IL21RQ9HBE5 538 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 GDF3Q9NR23 364 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 GPR27Q9NS67 375 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 B4GALT6Q9UBX8 382 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 PHTF1Q9UMS5 762 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 RPL26L1Q9UNX3 145 aaKnown RBP11.29□□□□□ -0.6
ERCC8-208ENST00000497892 PPIL1Q9Y3C6 166 aa11.29□□□□□ -0.6
ERCC8-208ENST00000497892 POM121BA6NF01 834 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 NPIPB15A6NHN6 443 aaPredicted RBP11.28□□□□□ -0.6
ERCC8-208ENST00000497892 J3QL48 77 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 FPGTO14772 594 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 DFNA5O60443 496 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 PTMAP06454 111 aaKnown RBP11.28□□□□□ -0.6
ERCC8-208ENST00000497892 ELFN1P0C7U0 828 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 THEGLP0DJG4 465 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 LHCGRP22888 699 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 VIPR1P32241 457 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 IGFALSP35858 605 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 CD86P42081 329 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 CNGA3Q16281 694 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 LIPIQ6XZB0 460 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 CDKL3Q8IVW4 592 aaPredicted RBP11.28□□□□□ -0.6
ERCC8-208ENST00000497892 SLC22A18ASQ8N1D0 253 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 TP53I13Q8NBR0 393 aaPredicted RBP11.28□□□□□ -0.6
ERCC8-208ENST00000497892 OR13H1Q8NG92 308 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 TADA1Q96BN2 335 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 KLHDC7BQ96G42 594 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 BMFQ96LC9 184 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 VAT1Q99536 393 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 ELF4Q99607 663 aaPredicted RBP11.28□□□□□ -0.6
ERCC8-208ENST00000497892 SLC25A51Q9H1U9 297 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 CARD9Q9H257 536 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 ERVMER34-1Q9H9K5 563 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 GLOD4Q9HC38 313 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 TM7SF3Q9NS93 570 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 COQ6Q9Y2Z9 468 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 PCDHGB2Q9Y5G2 931 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 HS3ST3A1Q9Y663 406 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 SPTBN2O15020 2390 aa11.28□□□□□ -0.6
ERCC8-208ENST00000497892 A0A0J9YYE9 177 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 A0A1B0GTQ1 180 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 GOLGA6L9A6NEM1 432 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 CAPN8A6NHC0 703 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 H7C0C1 242 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 PSMD11O00231 422 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 ZNF189O75820 626 aaPredicted RBP11.27□□□□□ -0.61
ERCC8-208ENST00000497892 HEXIM1O94992 359 aaKnown RBP11.27□□□□□ -0.61
ERCC8-208ENST00000497892 PRLP01236 227 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 TRBC1P01850 177 aa11.27□□□□□ -0.61
ERCC8-208ENST00000497892 ALPIP09923 528 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms