RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-209	ENST00000497871	UGT1A5	P35504	534 aa		18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	LBR	Q14739	615 aa	Known RBP	18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	PNCK	Q6P2M8	343 aa		18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	NPW	Q8N729	165 aa		18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	ZNF599	Q96NL3	588 aa		18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	FOXP3	Q9BZS1	431 aa		18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	HAUS4	Q9H6D7	363 aa		18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	FGF22	Q9HCT0	170 aa		18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	MRPL40	Q9NQ50	206 aa	Known RBP	18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	RTN4	Q9NQC3	1192 aa	Known RBP	18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	AIPL1	Q9NZN9	384 aa		18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	CWC15	Q9P013	229 aa	Known RBP	18.29	■□□□□ 0.52
ATPAF2-209	ENST00000497871	ATM	Q13315	3056 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871		A0A1W2PQ67	120 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	LRRC53	A6NM62	1247 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	LRCH4	O75427	683 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	GM2A	P17900	193 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	SLC5A2	P31639	672 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	SLC10A7	Q0GE19	358 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	DPYS	Q14117	519 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	ACOX1	Q15067	660 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	ZSCAN23	Q3MJ62	389 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	CERCAM	Q5T4B2	595 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	TMCO4	Q5TGY1	634 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	CCNJL	Q8IV13	435 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871		Q8N9G6	341 aa	Predicted RBP	18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	NSMCE3	Q96MG7	304 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	CCNL2	Q96S94	520 aa	Predicted RBP	18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	LGR4	Q9BXB1	951 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	TRIM7	Q9C029	511 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	NAT10	Q9H0A0	1025 aa	Known RBP	18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	TMEM168	Q9H0V1	697 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	DPEP2	Q9H4A9	486 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	WDR26	Q9H7D7	661 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	ZWILCH	Q9H900	591 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	KCTD5	Q9NXV2	234 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	CNOT8	Q9UFF9	292 aa	Known RBP	18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871	ACSL6	Q9UKU0	697 aa		18.28	■□□□□ 0.52
ATPAF2-209	ENST00000497871		A8MX80	341 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	GOLGA6L22	H0YM25	854 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	NUDT21	O43809	227 aa	Known RBP	18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	NOBOX	O60393	691 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	ZIC2	O95409	532 aa	Predicted RBP	18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	PCK1	P35558	622 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	HSPA9	P38646	679 aa	Known RBP	18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	ZFP36L1	Q07352	338 aa	Known RBP	18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	HLTF	Q14527	1009 aa	Known RBP eCLIP	18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	ASIC2	Q16515	512 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	TSR1	Q2NL82	804 aa	Known RBP	18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	C14orf28	Q4W4Y0	310 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	ZNF571	Q7Z3V5	609 aa	Predicted RBP	18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	AOPEP	Q8N6M6	819 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	TMEM159	Q96B96	161 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	COQ10A	Q96MF6	247 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	CYP4F12	Q9HCS2	524 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	MRPL47	Q9HD33	250 aa	Known RBP	18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	LRIT1	Q9P2V4	623 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	B4GALT6	Q9UBX8	382 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	SCIN	Q9Y6U3	715 aa		18.27	■□□□□ 0.52
ATPAF2-209	ENST00000497871	NVL	O15381	856 aa	Known RBP	18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	HTRA2	O43464	458 aa	Predicted RBP	18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	SOCS5	O75159	536 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	JMJD7	P0C870	316 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	HGF	P14210	728 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	CR2	P20023	1033 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	NFKBIA	P25963	317 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	PRKCI	P41743	596 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	ARHGEF7	Q14155	803 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	LY6D	Q14210	128 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	BOLA3	Q53S33	107 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	CCDC183	Q5T5S1	534 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	KIAA1614	Q5VZ46	1190 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	JAML	Q86YT9	394 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	TP53INP2	Q8IXH6	220 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	CBARP	Q8N350	705 aa	Predicted RBP	18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	SEMA4C	Q9C0C4	833 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	MOSPD1	Q9UJG1	213 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	PCDHGC4	Q9Y5F7	938 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	RNF215	Q9Y6U7	377 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	FLNB	O75369	2602 aa	Known RBP	18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	KIF26B	Q2KJY2	2108 aa		18.26	■□□□□ 0.51
ATPAF2-209	ENST00000497871	PRSS38	A1L453	326 aa		18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	TTC24	A2A3L6	582 aa	Predicted RBP	18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871		H3BRJ5	948 aa		18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	DDX3X	O00571	662 aa	Known RBP eCLIP	18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	EFS	O43281	561 aa		18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	PEX11B	O96011	259 aa		18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	MYBL1	P10243	752 aa		18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	MYCLP1	P12525	358 aa	Predicted RBP	18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	ANP32A	P39687	249 aa	Known RBP	18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	ARL4A	P40617	200 aa		18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	TYRO3	Q06418	890 aa		18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	ZNF235	Q14590	738 aa		18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	DPYSL2	Q16555	572 aa		18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	FILIP1L	Q4L180	1135 aa		18.25	■□□□□ 0.51
ATPAF2-209	ENST00000497871	SPECC1L	Q69YQ0	1117 aa		18.25	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms