RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 DMWDQ09019 674 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 NAB1Q13506 487 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 QPCTQ16769 361 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 HNRNPA1L2Q32P51 320 aaKnown RBP14.25□□□□□ -0.13
VPS26A-209ENST00000497564 HSP90B2PQ58FF3 399 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 ARMC12Q5T9G4 340 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 AGBL2Q5U5Z8 902 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 DPY19L3Q6ZPD9 716 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 CAMK1DQ8IU85 385 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 CNPY4Q8N129 248 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.25□□□□□ -0.13
VPS26A-209ENST00000497564 BRSK1Q8TDC3 778 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 PIH1D2Q8WWB5 315 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 ZNF669Q96BR6 464 aaPredicted RBP14.25□□□□□ -0.13
VPS26A-209ENST00000497564 PGM2Q96G03 612 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 FCRL3Q96P31 734 aaPredicted RBP14.25□□□□□ -0.13
VPS26A-209ENST00000497564 SRPK1Q96SB4 655 aaKnown RBP14.25□□□□□ -0.13
VPS26A-209ENST00000497564 C19orf43Q9BQ61 176 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 TRIM56Q9BRZ2 755 aaKnown RBP14.25□□□□□ -0.13
VPS26A-209ENST00000497564 TMEM245Q9H330 911 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 CHRAC1Q9NRG0 131 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 HACD3Q9P035 362 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 VPS18Q9P253 973 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 THAP10Q9P2Z0 257 aaPredicted RBP14.25□□□□□ -0.13
VPS26A-209ENST00000497564 LGALS13Q9UHV8 139 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 FBXO4Q9UKT5 387 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 PLXNB3Q9ULL4 1909 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 PLXNA2O75051 1894 aa14.25□□□□□ -0.13
VPS26A-209ENST00000497564 EDDM13A0A1B0GTR0 161 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 TSPAN11A1L157 253 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 TBC1D3BA6NDS4 549 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 PRR23AA6NEV1 266 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 LDB2O43679 373 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 GFRA3O60609 400 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 PIGNO95427 931 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 HNRNPLP14866 589 aaKnown RBP eCLIP14.24□□□□□ -0.13
VPS26A-209ENST00000497564 NMBRP28336 390 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 ACVR1Q04771 509 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 ENPP2Q13822 863 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 LRRC32Q14392 662 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 ZNF234Q14588 700 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 LONRF1Q17RB8 773 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 KBTBD12Q3ZCT8 623 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 TNFAIP8L3Q5GJ75 292 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 TSTD2Q5T7W7 516 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 KIAA0930Q6ICG6 404 aaPredicted RBP14.24□□□□□ -0.13
VPS26A-209ENST00000497564 TRMT10BQ6PF06 316 aaKnown RBP14.24□□□□□ -0.13
VPS26A-209ENST00000497564 MARK2Q7KZI7 788 aaKnown RBP14.24□□□□□ -0.13
VPS26A-209ENST00000497564 RYBPQ8N488 228 aaPredicted RBP14.24□□□□□ -0.13
VPS26A-209ENST00000497564 GOLGA6L1Q8N7Z2 621 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 LPCAT1Q8NF37 534 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 OR6K2Q8NGY2 324 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 HCAR2Q8TDS4 363 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 EPS8L3Q8TE67 593 aaKnown RBP14.24□□□□□ -0.13
VPS26A-209ENST00000497564 SLC44A1Q8WWI5 657 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 NELL1Q92832 810 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 PTPRN2Q92932 1015 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 RMDN1Q96DB5 314 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 MFSD3Q96ES6 412 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 CERS2Q96G23 380 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 P2RY13Q9BPV8 354 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 HEPHQ9BQS7 1158 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 OSBPL1AQ9BXW6 950 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 SUV39H2Q9H5I1 410 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 PPIL1Q9Y3C6 166 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 PCDHB9Q9Y5E1 797 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 WASF2Q9Y6W5 498 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 SPTBN4Q9H254 2564 aa14.24□□□□□ -0.13
VPS26A-209ENST00000497564 A0A0J9YYE9 177 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 RNF40O75150 1001 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 CRTAMO95727 393 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 TRBC1P01850 177 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 PAMP19021 973 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 MGAT5Q09328 741 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 GRSF1Q12849 480 aaKnown RBP eCLIP14.23□□□□□ -0.13
VPS26A-209ENST00000497564 TAF1AQ15573 450 aaPredicted RBP14.23□□□□□ -0.13
VPS26A-209ENST00000497564 FNDC3BQ53EP0 1204 aaKnown RBP14.23□□□□□ -0.13
VPS26A-209ENST00000497564 PDPK2PQ6A1A2 396 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 ADGRD1Q6QNK2 874 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 CES3Q6UWW8 571 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 GDPD4Q6W3E5 623 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 MAMSTRQ6ZN01 415 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 LRRC6Q86X45 466 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 SPEM1Q8N4L4 309 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 CHST14Q8NCH0 376 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 CDKL2Q92772 493 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 ZNF778Q96MU6 729 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 LYSMD1Q96S90 227 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 PAFAH2Q99487 392 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 TRABDQ9H4I3 376 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 ZDHHC6Q9H6R6 413 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 MAGEE1Q9HCI5 957 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.23□□□□□ -0.13
VPS26A-209ENST00000497564 PSMC3IPQ9P2W1 217 aaPredicted RBP14.23□□□□□ -0.13
VPS26A-209ENST00000497564 DKK3Q9UBP4 350 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 ZNF180Q9UJW8 692 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 HCN2Q9UL51 889 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 PHTF1Q9UMS5 762 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 SPO11Q9Y5K1 396 aa14.23□□□□□ -0.13
VPS26A-209ENST00000497564 BPTFQ12830 3046 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms