RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 SCFD2Q8WU76 684 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 TMEM170AQ8WVE7 144 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 USP6NLQ92738 828 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 FAM149B1Q96BN6 582 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 PABPC5Q96DU9 382 aaKnown RBP3.41□□□□□ -1.86
PHC3-216ENST00000497171 WDFY2Q96P53 400 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 GFM1Q96RP9 751 aaKnown RBP3.41□□□□□ -1.86
PHC3-216ENST00000497171 NPFFR1Q9GZQ6 430 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 TASP1Q9H6P5 420 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 MVB12BQ9H7P6 319 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 FBRSL1Q9HCM7 1045 aaKnown RBP3.41□□□□□ -1.86
PHC3-216ENST00000497171 BPIFA1Q9NP55 256 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 SLC6A13Q9NSD5 602 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 RRP7BPQ9NSQ0 103 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 HCFC1R1Q9NWW0 138 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 HAO1Q9UJM8 370 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 VPS28Q9UK41 221 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 GPR34Q9UPC5 381 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 AAR2Q9Y312 384 aaKnown RBP3.41□□□□□ -1.86
PHC3-216ENST00000497171 CAPN7Q9Y6W3 813 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 KIF26BQ2KJY2 2108 aa3.41□□□□□ -1.86
PHC3-216ENST00000497171 RUSC2Q8N2Y8 1516 aa3.4□□□□□ -1.86
PHC3-216ENST00000497171 A0A0G2JK05 382 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 A0A1W2PQM1 296 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 A6NCN8 305 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 CBY3A6NI87 242 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 HSPB2A8KAH6 182 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 BTBD18B2RXH4 712 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 USP17L23D6RBM5 183 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 NPIPB11E5RHQ5 1161 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 SEC14L5O43304 696 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 MTA2O94776 668 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 RGS11O94810 467 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 CLDN7O95471 211 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 TFP02787 698 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 SERPINB2P05120 415 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 EIF2S1P05198 315 aaKnown RBP3.4□□□□□ -1.87
PHC3-216ENST00000497171 LAMP2P13473 410 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 RARGP13631 454 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 ERVFC1-1P60608 527 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 SORDQ00796 357 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 POU3F1Q03052 451 aaPredicted RBP3.4□□□□□ -1.87
PHC3-216ENST00000497171 CEBPZQ03701 1054 aaKnown RBP3.4□□□□□ -1.87
PHC3-216ENST00000497171 PKP1Q13835 747 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 HSPB2Q16082 182 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 NUGGCQ68CJ6 796 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 TXNDC8Q6A555 127 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 CYP20A1Q6UW02 462 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 LCTLQ6UWM7 567 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 SLC16A12Q6ZSM3 486 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 NOXA1Q86UR1 476 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 ZDHHC23Q8IYP9 409 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 PARP16Q8N5Y8 322 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 TMEM116Q8NCL8 245 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 SLC35F5Q8WV83 523 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 ARHGEF2Q92974 986 aaKnown RBP3.4□□□□□ -1.87
PHC3-216ENST00000497171 ZKSCAN4Q969J2 545 aaPredicted RBP3.4□□□□□ -1.87
PHC3-216ENST00000497171 MXRA8Q9BRK3 442 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 GLIS2Q9BZE0 524 aaPredicted RBP3.4□□□□□ -1.87
PHC3-216ENST00000497171 GHITMQ9H3K2 345 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 SMARCAD1Q9H4L7 1026 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 SH2D4AQ9H788 454 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 SYNCQ9H7C4 482 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 KAT14Q9H8E8 782 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 MAP6D1Q9H9H5 199 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 NCKIPSDQ9NZQ3 722 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 ADD3Q9UEY8 706 aaKnown RBP3.4□□□□□ -1.87
PHC3-216ENST00000497171 NDRG3Q9UGV2 375 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 ZNF215Q9UL58 517 aaPredicted RBP3.4□□□□□ -1.87
PHC3-216ENST00000497171 RABGAP1Q9Y3P9 1069 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 LYVE1Q9Y5Y7 322 aa3.4□□□□□ -1.87
PHC3-216ENST00000497171 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.39□□□□□ -1.87
PHC3-216ENST00000497171 ERI2A8K979 691 aaKnown RBP3.39□□□□□ -1.87
PHC3-216ENST00000497171 MYO1GB0I1T2 1018 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 KDM4EB2RXH2 506 aaPredicted RBP3.39□□□□□ -1.87
PHC3-216ENST00000497171 EBAG9O00559 213 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 MDM4O15151 490 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 MT-CYBP00156 380 aaPredicted RBP3.39□□□□□ -1.87
PHC3-216ENST00000497171 CENPBP07199 599 aaPredicted RBP3.39□□□□□ -1.87
PHC3-216ENST00000497171 CLTBP09497 229 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 MYZAPP0CAP1 466 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 ETFAP13804 333 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 CHRNB2P17787 502 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 ALOX12P18054 663 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 SRD5A1P18405 259 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 ITGAXP20702 1163 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 RYKP34925 604 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 HADHAP40939 763 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 RFX2P48378 723 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 PIP4K2AP48426 406 aaPredicted RBP3.39□□□□□ -1.87
PHC3-216ENST00000497171 CENPAP49450 140 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 F2RL1P55085 397 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 SNX16P57768 344 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 MC1RQ01726 317 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 FGFBP1Q14512 234 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 LPIN1Q14693 890 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 DRAP1Q14919 205 aaPredicted RBP3.39□□□□□ -1.87
PHC3-216ENST00000497171 WTAPQ15007 396 aa3.39□□□□□ -1.87
PHC3-216ENST00000497171 SF3B4Q15427 424 aaKnown RBP eCLIP3.39□□□□□ -1.872e-12■■■■■ 34.2
PHC3-216ENST00000497171 SHBQ15464 509 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms