RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 F8W810 466 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 I3L4J1 428 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 PPEF2O14830 753 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 XPO1O14980 1071 aaKnown RBP3.16□□□□□ -1.9
SHTN1-206ENST00000497044 ZW10O43264 779 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 MGRN1O60291 552 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 VNN1O95497 513 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 PRAMEF12O95522 483 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 ITGA2BP08514 1039 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 ALPPL2P10696 532 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 FOSL1P15407 271 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 PTX3P26022 381 aaPredicted RBP3.16□□□□□ -1.9
SHTN1-206ENST00000497044 LSP1P33241 339 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 COPAP53621 1224 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 TPM4P67936 248 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 BST2Q10589 180 aaKnown RBP3.16□□□□□ -1.9
SHTN1-206ENST00000497044 PNOCQ13519 176 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 CUL2Q13617 745 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 TRIM25Q14258 630 aaKnown RBP3.16□□□□□ -1.9
SHTN1-206ENST00000497044 SHBQ15464 509 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 MAN2A1Q16706 1144 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 TPD52L1Q16890 204 aaPredicted RBP3.16□□□□□ -1.9
SHTN1-206ENST00000497044 INO80DQ53TQ3 878 aaPredicted RBP3.16□□□□□ -1.9
SHTN1-206ENST00000497044 LRRC31Q6UY01 552 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 GBP6Q6ZN66 633 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 ZNF677Q86XU0 584 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 VSTM4Q8IW00 320 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 CHCHD4Q8N4Q1 142 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 ANKRD52Q8NB46 1076 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 OR2T34Q8NGX1 318 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 NAT6Q93015 286 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 CAVIN3Q969G5 261 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 PCED1BQ96HM7 432 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 B3GALT6Q96L58 329 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 NOX5Q96PH1 765 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 FCRL4Q96PJ5 515 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 CXCL16Q9H2A7 254 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 EPB41L1Q9H4G0 881 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 CNGB3Q9NQW8 809 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 SPHK2Q9NRA0 654 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 ANO10Q9NW15 660 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 HECAQ9UBI9 543 aaPredicted RBP3.16□□□□□ -1.9
SHTN1-206ENST00000497044 TAGLN3Q9UI15 199 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 MAN2B2Q9Y2E5 1009 aa3.16□□□□□ -1.9
SHTN1-206ENST00000497044 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.16□□□□□ -1.9
SHTN1-206ENST00000497044 A0A1W2PPC4 97 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 PRSS38A1L453 326 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 ZNF840PA6NDX5 716 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 TRIM64A6NGJ6 449 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 HGSO14964 777 aaPredicted RBP3.15□□□□□ -1.9
SHTN1-206ENST00000497044 KLF8O95600 359 aaPredicted RBP3.15□□□□□ -1.9
SHTN1-206ENST00000497044 ERBB2P04626 1255 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 GOT1P17174 413 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 PTGER3P43115 390 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 DHPSP49366 369 aaPredicted RBP3.15□□□□□ -1.9
SHTN1-206ENST00000497044 COG7P83436 770 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 CYP27A1Q02318 531 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 GRM3Q14832 879 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 HLA-BQ31612 363 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 MINDY4Q4G0A6 757 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 PRRT3Q5FWE3 981 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 MDH1BQ5I0G3 518 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 MSANTD2Q6P1R3 559 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 CYB5D1Q6P9G0 228 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 ZNF783Q6ZMS7 281 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 ATAD1Q8NBU5 361 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 ADCY4Q8NFM4 1077 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 KCNE4Q8WWG9 221 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 ASB15Q8WXK1 588 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 FBXO32Q969P5 355 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 SLC35C1Q96A29 364 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 BOCQ9BWV1 1114 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 ZNF518BQ9C0D4 1074 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 SLITRK6Q9H5Y7 841 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 TCFL5Q9UL49 500 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 MYO6Q9UM54 1294 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 CEP83Q9Y592 693 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 HEMK1Q9Y5R4 338 aaPredicted RBP3.15□□□□□ -1.9
SHTN1-206ENST00000497044 KLF2Q9Y5W3 355 aaPredicted RBP3.15□□□□□ -1.9
SHTN1-206ENST00000497044 TTC28Q96AY4 2481 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 B4E171 279 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 H3BML4 177 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 PJA2O43164 708 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 MT-CO3P00414 261 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 LIPCP11150 499 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 CHKAP35790 457 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 VIPR2P41587 438 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 TSPAN7P41732 249 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 ECI1P42126 302 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 RPL34P49207 117 aaKnown RBP3.15□□□□□ -1.9
SHTN1-206ENST00000497044 NDST1P52848 882 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 STARD3Q14849 445 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 CNGA2Q16280 664 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 STX1AQ16623 288 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 TUBB8Q3ZCM7 444 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 RAB41Q5JT25 222 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 C1orf220Q5T0J3 134 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 TCERG1LQ5VWI1 586 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 BTBD8Q5XKL5 378 aa3.15□□□□□ -1.9
SHTN1-206ENST00000497044 ANKRD40Q6AI12 368 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms