RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 KIAA0586Q9BVV6 1533 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 A0A0U1RQK1 487 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF320A2RRD8 509 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 GSAPA4D1B5 854 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ERVV-1B6SEH8 477 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM227AF5H4B4 570 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 LAD1O00515 517 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 GPR171O14626 319 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 FFAR2O15552 330 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SYNCRIPO60506 623 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TOM1L1O75674 476 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PRPF6O94906 941 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SGPL1O95470 568 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CFBP00751 764 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CALB1P05937 261 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF888P0CJ79 500 aaPredicted RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 STAG3L3P0CL85 134 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 C6P13671 934 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PFKLP17858 780 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 RAB4AP20338 218 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TYK2P29597 1187 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 MAPK4P31152 587 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 HSPA9P38646 679 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 RABIFP47224 123 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PITPNBP48739 271 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 STARD6P59095 220 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 GMFBP60983 142 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 KIF23Q02241 960 aaPredicted RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 OCA2Q04671 838 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PMS2P3Q13401 168 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 FASTKD3Q14CZ7 662 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 C2orf76Q3KRA6 126 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 DNAL1Q4LDG9 190 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ANKRD20A4Q4UJ75 823 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PAN2Q504Q3 1202 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 RARS2Q5T160 578 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 KRT40Q6A162 431 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SPOPLQ6IQ16 392 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CYP4F22Q6NT55 531 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 MSANTD1Q6ZTZ1 278 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 FKBP9P1Q75LS8 142 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 GLRX5Q86SX6 157 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 KBTBD6Q86V97 674 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ZC3H18Q86VM9 953 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 RIOX2Q8IUF8 465 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ELMOD2Q8IZ81 293 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SRBD1Q8N5C6 995 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF366Q8N895 744 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 NOA1Q8NC60 698 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SPATA4Q8NEY3 305 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 LHFPL5Q8TAF8 219 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SH3RF3Q8TEJ3 882 aaPredicted RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PIGOQ8TEQ8 1089 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SMG7Q92540 1137 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 MRPS27Q92552 414 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM122AQ96E09 287 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 WNK4Q96J92 1243 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 DNAJC1Q96KC8 554 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 FCRL4Q96PJ5 515 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 AGAP2Q99490 1192 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 BPIFA3Q9BQP9 254 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TIPINQ9BVW5 301 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TBC1D10AQ9BXI6 508 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 MRPL4Q9BYD3 311 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 B3GNT5Q9BYG0 378 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 NAT10Q9H0A0 1025 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TMEM168Q9H0V1 697 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 MARCH7Q9H992 704 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SYTL2Q9HCH5 934 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PNPLA8Q9NP80 782 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 EIF2B3Q9NR50 452 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PARVAQ9NVD7 372 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 HYPKQ9NX55 129 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 GIN1Q9NXP7 522 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TMOD3Q9NYL9 352 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PSMC3IPQ9P2W1 217 aaPredicted RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 NUDT5Q9UKK9 219 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 VPS4AQ9UN37 437 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PIN4Q9Y237 131 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 IFT52Q9Y366 437 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 USH1CQ9Y6N9 552 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 MED14O60244 1454 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ABCC10Q5T3U5 1492 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PDS5AQ29RF7 1337 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CEP162Q5TB80 1403 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 MYOM3Q5VTT5 1437 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 BECN2A8MW95 431 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 C2orf74A8MZ97 194 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 B4E1Z4 1266 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 H7BY64 318 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ARVCFO00192 962 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TAF4O00268 1085 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ACKR2O00590 384 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 DVL2O14641 736 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ADAMTS3O15072 1205 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ANGPT2O15123 496 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ALOX15BO15296 676 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 EIF3HO15372 352 aaKnown RBP eCLIP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CYTIPO60759 359 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 BEST1O76090 585 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms