RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 SLC20A2Q08357 652 aa13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 STX3Q13277 289 aa13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 LACTB2Q53H82 288 aaPredicted RBP13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 TAF1BQ53T94 588 aaPredicted RBP13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 TMC5Q6UXY8 1006 aa13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 TTC30BQ8N4P2 665 aa13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 EFHBQ8N7U6 833 aa13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 OR6Y1Q8NGX8 325 aa13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 GABPB2Q8TAK5 448 aaPredicted RBP13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 PLCD4Q9BRC7 762 aa13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 TLE6Q9H808 572 aa13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 DPP7Q9UHL4 492 aa13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 DCTN4Q9UJW0 460 aa13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 MYO7AQ13402 2215 aa13.71□□□□□ -0.22
SPTBN1-205ENST00000496323 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 HTRA2O43464 458 aaPredicted RBP13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 ITM2AO43736 263 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 COL6A2P12110 1019 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 ARRB2P32121 409 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 NRIP1P48552 1158 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 CDKN2DP55273 166 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 DUSP6Q16828 381 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 HECTD2Q5U5R9 776 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 ZNF549Q6P9A3 640 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 SMG7Q92540 1137 aaKnown RBP13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 EID2BQ96D98 161 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 RSPRY1Q96DX4 576 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 PBX4Q9BYU1 374 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 TRIM55Q9BYV6 548 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 CATSPERZQ9NTU4 200 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 CPSF2Q9P2I0 782 aaKnown RBP13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 TBC1D14Q9P2M4 693 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 RUVBL2Q9Y230 463 aaKnown RBP13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 HS3ST2Q9Y278 367 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 CRYL1Q9Y2S2 319 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 USH1CQ9Y6N9 552 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 NOTCH4Q99466 2003 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 CXorf51AA0A1B0GTR3 108 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 EPOPA6NHQ4 379 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 C2orf81A6NN90 581 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 TARM1B6A8C7 271 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 TK2O00142 265 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 HGSO14964 777 aaPredicted RBP13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 TRIM24O15164 1050 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 PAPLNO95428 1278 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 TROVE2P10155 538 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 LPOP22079 712 aaPredicted RBP13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 GLRBP48167 497 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 KCNC3Q14003 757 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 TYSND1Q2T9J0 566 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 GALNTL6Q49A17 601 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 ARMC12Q5T9G4 340 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 MRNIPQ6NTE8 343 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 ADIPOR2Q86V24 386 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 LCA5Q86VQ0 697 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 NXNL1Q96CM4 212 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 MYO19Q96H55 970 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 PIDD1Q9HB75 910 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 THAP1Q9NVV9 213 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 POLR3BQ9NW08 1133 aaPredicted RBP13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 ZMYM5Q9UJ78 669 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 VWA7Q9Y334 891 aa13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 MTF2Q9Y483 593 aaPredicted RBP13.7□□□□□ -0.22
SPTBN1-205ENST00000496323 LYPLA1O75608 230 aaPredicted RBP13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 UBOX5O94941 541 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 KLHL2O95198 593 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 WISP3O95389 354 aaPredicted RBP13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 SERPINE1P05121 402 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 ALPIP09923 528 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 PABPC1P11940 636 aaKnown RBP13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 CTPS1P17812 591 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 OGNP20774 298 aaKnown RBP13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 STC1P52823 247 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 TIAL1Q01085 375 aaKnown RBP eCLIP13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 ITGA9Q13797 1035 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 HSF5Q4G112 596 aaPredicted RBP13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 TMEM215Q68D42 235 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 METTL3Q86U44 580 aaKnown RBP13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 FSTL5Q8N475 847 aaPredicted RBP13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 OR2AP1Q8NGE2 309 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 ZNF398Q8TD17 642 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 GDPD5Q8WTR4 605 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 MYLIPQ8WY64 445 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 UNKQ9C0B0 810 aaKnown RBP13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 IGSF5Q9NSI5 407 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 NUMBLQ9Y6R0 609 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 TRANK1O15050 2925 aa13.69□□□□□ -0.22
SPTBN1-205ENST00000496323 A0A087X1B8 175 aa13.68□□□□□ -0.22
SPTBN1-205ENST00000496323 A0A0G2JND7 137 aa13.68□□□□□ -0.22
SPTBN1-205ENST00000496323 RALBP11234 206 aa13.68□□□□□ -0.22
SPTBN1-205ENST00000496323 GRIA4P48058 902 aa13.68□□□□□ -0.22
SPTBN1-205ENST00000496323 CDKN1CP49918 316 aaPredicted RBP13.68□□□□□ -0.22
SPTBN1-205ENST00000496323 EPHB1P54762 984 aa13.68□□□□□ -0.22
SPTBN1-205ENST00000496323 AFTPHQ6ULP2 937 aa13.68□□□□□ -0.22
SPTBN1-205ENST00000496323 TMEM207Q6UWW9 146 aa13.68□□□□□ -0.22
SPTBN1-205ENST00000496323 NAPRTQ6XQN6 538 aa13.68□□□□□ -0.22
SPTBN1-205ENST00000496323 ZSWIM9Q86XI8 627 aa13.68□□□□□ -0.22
SPTBN1-205ENST00000496323 PPP1R14CQ8TAE6 165 aa13.68□□□□□ -0.22
SPTBN1-205ENST00000496323 HEXDCQ8WVB3 486 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms