RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SORBS2O94875 1100 aaKnown RBP11.1□□□□□ -0.63
CMSS1-208ENST00000496116 NDST3O95803 873 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 ATF6P18850 670 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 FDXRP22570 491 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 SP100P23497 879 aaPredicted RBP11.1□□□□□ -0.63
CMSS1-208ENST00000496116 PMLP29590 882 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 TUFMP49411 452 aaKnown RBP11.1□□□□□ -0.63
CMSS1-208ENST00000496116 PLK1P53350 603 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 NFKB2Q00653 900 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 GALNT3Q14435 633 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 RFTN1Q14699 578 aaPredicted RBP11.1□□□□□ -0.63
CMSS1-208ENST00000496116 MAPRE2Q15555 327 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 CAPRIN2Q6IMN6 1127 aaKnown RBP11.1□□□□□ -0.63
CMSS1-208ENST00000496116 APLFQ8IW19 511 aaPredicted RBP11.1□□□□□ -0.63
CMSS1-208ENST00000496116 CFAP52Q8N1V2 620 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 HIPK4Q8NE63 616 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 FBXO22Q8NEZ5 403 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 OR4L1Q8NH43 312 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 RCN3Q96D15 328 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 DNAJC1Q96KC8 554 aaKnown RBP11.1□□□□□ -0.63
CMSS1-208ENST00000496116 ZNF512Q96ME7 567 aaPredicted RBP11.1□□□□□ -0.63
CMSS1-208ENST00000496116 ALG9Q9H6U8 611 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 CATSPERZQ9NTU4 200 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 MARCH4Q9P2E8 410 aaPredicted RBP11.1□□□□□ -0.63
CMSS1-208ENST00000496116 UBA2Q9UBT2 640 aaPredicted RBP11.1□□□□□ -0.63
CMSS1-208ENST00000496116 FIS1Q9Y3D6 152 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 KCTD3Q9Y597 815 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 ZFP37Q9Y6Q3 630 aaPredicted RBP11.1□□□□□ -0.63
CMSS1-208ENST00000496116 A0A0D9SEW6 157 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 TBKBP1A7MCY6 615 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 TRPA1O75762 1119 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 WISP3O95389 354 aaPredicted RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 GNRH1P01148 92 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 INHAP05111 366 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 HSPA1AP0DMV8 641 aaKnown RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 HSPA1BP0DMV9 641 aaKnown RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 KCNA5P22460 613 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 OXCT1P55809 520 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 XIAPP98170 497 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 ISCA2Q86U28 154 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 KBTBD6Q86V97 674 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 KBTBD2Q8IY47 623 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 L3HYPDHQ96EM0 354 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 MYEOVQ96EZ4 313 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 ASB2Q96Q27 587 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 PSKH2Q96QS6 385 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 CDRT15Q96T59 188 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 SUDS3Q9H7L9 328 aaPredicted RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 SCOCQ9UIL1 159 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 CHD5Q8TDI0 1954 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 BPTFQ12830 3046 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 CCDC162PA2VCL2 907 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 MAGEA13PA6NCF6 341 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 A6NHS1 94 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 BUD23O43709 281 aaKnown RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 AOC2O75106 756 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 GPC4O75487 556 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 CLDN11O75508 207 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 GJB3O75712 270 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 SUPT7LO94864 414 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 SLC4A1P02730 911 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 ENO3P13929 434 aaPredicted RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 RAG1P15918 1043 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 HOXD9P28356 352 aaPredicted RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 SLC6A4P31645 630 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 STC1P52823 247 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 CDC16Q13042 620 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 STX5Q13190 355 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 PDAP1Q13442 181 aaKnown RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 SQLEQ14534 574 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 ZNF678Q5SXM1 525 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 TMEM154Q6P9G4 183 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 KLHDC10Q6PID8 442 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 PRSS55Q6UWB4 352 aaPredicted RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 TMEM207Q6UWW9 146 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 CHSY3Q70JA7 882 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 RAB44Q7Z6P3 723 aaPredicted RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 PELI3Q8N2H9 469 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 LRRC43Q8N309 656 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 EFCAB3Q8N7B9 438 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 OR13C4Q8NGS5 318 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 PLD4Q96BZ4 506 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 MARK4Q96L34 752 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 NR1H4Q96RI1 486 aaPredicted RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 SPON2Q9BUD6 331 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 MRPL1Q9BYD6 325 aaKnown RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 KLHL4Q9C0H6 718 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 WDR41Q9HAD4 459 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 INTS10Q9NVR2 710 aaKnown RBP11.09□□□□□ -0.63
CMSS1-208ENST00000496116 HCSTQ9UBK5 93 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 TRAF6Q9Y4K3 522 aa11.09□□□□□ -0.63
CMSS1-208ENST00000496116 EIF4E1BA6NMX2 242 aaKnown RBP11.08□□□□□ -0.64
CMSS1-208ENST00000496116 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 UBDO15205 165 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 INSIG1O15503 277 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 CFLARO15519 480 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 KDELR3O43731 214 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 CD1DP15813 335 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 ZNF37AP17032 561 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms