RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 FGBP02675 491 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 PYGLP06737 847 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 SERPINA6P08185 405 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 LTA4HP09960 611 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 CTSAP10619 480 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 FGF3P11487 239 aaPredicted RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 CSF2RAP15509 400 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 HMGA1P17096 107 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 HDCP19113 662 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 TARSP26639 723 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 GABRR2P28476 465 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 SERPINB3P29508 390 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 SLC6A4P31645 630 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 ACVRL1P37023 503 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 SLC26A3P40879 764 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 LEPRP48357 1165 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 SCNN1BP51168 640 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 AQP5P55064 265 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 AP1S1P61966 158 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 DEFB103AP81534 67 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 MPP1Q00013 466 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 USP4Q13107 963 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 PRKAA1Q13131 559 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 ITGA9Q13797 1035 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 RCN2Q14257 317 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 TAF1AQ15573 450 aaPredicted RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 SMAD1Q15797 465 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 MPPE1Q53F39 396 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 INO80DQ53TQ3 878 aaPredicted RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 SIRPB2Q5JXA9 342 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 PPM1LQ5SGD2 360 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 RNF219Q5W0B1 726 aaPredicted RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 DENND5AQ6IQ26 1287 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 UGT3A1Q6NUS8 523 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 C16orf46Q6P387 395 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 TMC7Q7Z402 723 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 DNAJB7Q7Z6W7 309 aaPredicted RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 CLNKQ7Z7G1 428 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 MTDHQ86UE4 582 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 SLC41A1Q8IVJ1 513 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 C10orf107Q8IVU9 208 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 CFAP52Q8N1V2 620 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 STK40Q8N2I9 435 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 CPXM2Q8N436 756 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 DCAF4L2Q8NA75 395 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 LEMD2Q8NC56 503 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 OR7D4Q8NG98 312 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 PDCD6IPQ8WUM4 868 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 STON2Q8WXE9 905 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 ACDQ96AP0 544 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 SKA1Q96BD8 255 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 ARMC5Q96C12 935 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 TMA16Q96EY4 203 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 PAWRQ96IZ0 340 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 ASB2Q96Q27 587 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 MRPL57Q9BQC6 102 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 ILKAPQ9H0C8 392 aaPredicted RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 ZBP1Q9H171 429 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 C12orf65Q9H3J6 166 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 ATXN3LQ9H3M9 355 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 SYTL2Q9HCH5 934 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 GPAMQ9HCL2 828 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 ARHGEF3Q9NR81 526 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 TMEM216Q9P0N5 145 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 BAIAP2L1Q9UHR4 511 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 SLC25A13Q9UJS0 675 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 STOML2Q9UJZ1 356 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 AGO1Q9UL18 857 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 TMCO1Q9UM00 188 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 RUVBL2Q9Y230 463 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 DNAJC16Q9Y2G8 782 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 STK38LQ9Y2H1 464 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 TBC1D30Q9Y2I9 924 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 INSL6Q9Y581 213 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 COMMD10Q9Y6G5 202 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 MKI67P46013 3256 aaKnown RBP6.95□□□□□ -1.3
USP39-219ENST00000496047 C2orf16Q68DN1 1984 aa6.95□□□□□ -1.3
USP39-219ENST00000496047 DENND4AQ7Z401 1863 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 UNC80Q8N2C7 3258 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 CXorf51AA0A1B0GTR3 108 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 A0A1W2PQ67 120 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 CCDC189A1A4V9 331 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 TRPC5OSA6NMA1 111 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 SOBPA7XYQ1 873 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 GOLGA8TH3BQL2 631 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 FCHO1O14526 889 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 CHUKO15111 745 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 GYG2O15488 501 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 NPHS1O60500 1241 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 TSPAN3O60637 253 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 XYLBO75191 536 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 NDUFS3O75489 264 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 RASSF9O75901 435 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 GLUD1P00367 558 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 AHSGP02765 367 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 C8AP07357 584 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 MMP2P08253 660 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 DLDP09622 509 aaKnown RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 LPOP22079 712 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms