RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 IFNB1P01574 187 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 ITGAVP06756 1048 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 ZNF30P17039 623 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 TGM1P22735 817 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 PSMB4P28070 264 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 WNT3AP56704 352 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 ARHGAP8P85298 464 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 GRIK2Q13002 908 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 IHHQ14623 411 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 LRRC14Q15048 493 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 OASLQ15646 514 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 P3H1Q32P28 736 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 LIPIQ6XZB0 460 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 RASGEF1CQ8N431 466 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 DENND6BQ8NEG7 585 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 IPMKQ8NFU5 416 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 CCHCR1Q8TD31 782 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 MS4A14Q96JA4 679 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 MCCC1Q96RQ3 725 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 SRPK1Q96SB4 655 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 TMEM9BQ9NQ34 198 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 FSCN3Q9NQT6 498 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 TTC7AQ9ULT0 858 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 ANKRD6Q9Y2G4 727 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 SLCO1B1Q9Y6L6 691 aa12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 EP300Q09472 2414 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 RIF1Q5UIP0 2472 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-213ENST00000495232 DOCK9Q9BZ29 2069 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 C1orf232A0A0U1RR37 186 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 CAPN8A6NHC0 703 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 PSMD11O00231 422 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 WNT9AO14904 365 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 RECQL5O94762 991 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 HEXIM1O94992 359 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 CER1O95813 267 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 PRLP01236 227 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 EPOP01588 193 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 RABIFP47224 123 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 GDF10P55107 478 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 CLDN2P57739 230 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 RALGDSQ12967 914 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 FGL2Q14314 439 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 CNGA3Q16281 694 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 QPCTQ16769 361 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 PARP6Q2NL67 630 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 LRRC66Q68CR7 880 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 DRICH1Q6PGQ1 229 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 LAYNQ6UX15 382 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 PTAR1Q7Z6K3 402 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 TMEM145Q8NBT3 493 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 ACTRT1Q8TDG2 376 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 TADA1Q96BN2 335 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 OXNAD1Q96HP4 312 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 WDR24Q96S15 920 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 GDF3Q9NR23 364 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 DRG1Q9Y295 367 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 CA5BQ9Y2D0 317 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 SAR1BQ9Y6B6 198 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 FAM186AA6NE01 2351 aa12.11□□□□□ -0.47
CSNK1E-213ENST00000495232 ADAMTS9Q9P2N4 1935 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 A0A1W2PR77 199 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 E7EVH7 732 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 H0Y8X5 98 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 RAD51BO15315 384 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 PSMD3O43242 534 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 PCCBP05166 539 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 THEGLP0DJG4 465 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 HLA-DPA1P20036 260 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 SDHBP21912 280 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 CASQ1P31415 396 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 LMAN1P49257 510 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 AGERQ15109 404 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 SIX1Q15475 284 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 KIF19Q2TAC6 998 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 HS1BP3Q53T59 392 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 CRTC1Q6UUV9 634 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 KDELC1Q6UW63 502 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 KYAT3Q6YP21 454 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 GCNT7Q6ZNI0 430 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 Q6ZSR6 202 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 TSPAN33Q86UF1 283 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 DCP2Q8IU60 420 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 C17orf53Q8N3J3 647 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 OXR1Q8N573 874 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 MINDY1Q8N5J2 469 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 SLC25A41Q8N5S1 370 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 TP53I13Q8NBR0 393 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 COG1Q8WTW3 980 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 MAGOHBQ96A72 148 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 CENPTQ96BT3 561 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 RTP4Q96DX8 246 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 NUS1Q96E22 293 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 MRGPRX2Q96LB1 330 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 TRIB3Q96RU7 358 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 LYSMD1Q96S90 227 aa12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 KLF6Q99612 283 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-213ENST00000495232 FICDQ9BVA6 458 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms