RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 VPS39Q96JC1 886 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 PRICKLE1Q96MT3 831 aaPredicted RBP16.36■□□□□ 0.21
CBX4-204ENST00000495122 TSNARE1Q96NA8 513 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 NELL2Q99435 816 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 SLC13A1Q9BZW2 595 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 IARS2Q9NSE4 1012 aaKnown RBP16.36■□□□□ 0.21
CBX4-204ENST00000495122 SPATA6Q9NWH7 488 aaPredicted RBP16.36■□□□□ 0.21
CBX4-204ENST00000495122 CORO1CQ9ULV4 474 aaPredicted RBP16.36■□□□□ 0.21
CBX4-204ENST00000495122 SLC12A4Q9UP95 1085 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 MYOFQ9NZM1 2061 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 GFRA2O00451 464 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 HNRNPCL1O60812 293 aaKnown RBP16.35■□□□□ 0.21
CBX4-204ENST00000495122 DNAJC8O75937 253 aaPredicted RBP16.35■□□□□ 0.21
CBX4-204ENST00000495122 KLKB1P03952 638 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 DDX6P26196 483 aaKnown RBP eCLIP16.35■□□□□ 0.21
CBX4-204ENST00000495122 CRABP2P29373 138 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 ACVRL1P37023 503 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 SLC7A9P82251 487 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 DSC2Q02487 901 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 ACVR1Q04771 509 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 POU6F1Q14863 301 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 ZNF528Q3MIS6 628 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 GALNTL6Q49A17 601 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 TAF1BQ53T94 588 aaPredicted RBP16.35■□□□□ 0.21
CBX4-204ENST00000495122 MPP7Q5T2T1 576 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 ZC3H14Q6PJT7 736 aaKnown RBP16.35■□□□□ 0.21
CBX4-204ENST00000495122 Q6ZNB5 142 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 CLEC14AQ86T13 490 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 ZC3HC1Q86WB0 502 aaKnown RBP16.35■□□□□ 0.21
CBX4-204ENST00000495122 CPXM2Q8N436 756 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 C2CD4AQ8NCU7 369 aaPredicted RBP16.35■□□□□ 0.21
CBX4-204ENST00000495122 ARMC2Q8NEN0 867 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 C10orf82Q8WW14 230 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 PTPRN2Q92932 1015 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 IFT43Q96FT9 208 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 ZFRQ96KR1 1074 aaKnown RBP16.35■□□□□ 0.21
CBX4-204ENST00000495122 GCNAQ96QF7 691 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 SEMA3CQ99985 751 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 CINPQ9BW66 212 aaPredicted RBP16.35■□□□□ 0.21
CBX4-204ENST00000495122 IL21Q9HBE4 155 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 FBXO4Q9UKT5 387 aa16.35■□□□□ 0.21
CBX4-204ENST00000495122 MRPS17Q9Y2R5 130 aaKnown RBP16.35■□□□□ 0.21
CBX4-204ENST00000495122 MTO1Q9Y2Z2 717 aaKnown RBP16.35■□□□□ 0.21
CBX4-204ENST00000495122 CFAP73A6NFT4 308 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 MROH6A6NGR9 719 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 MAN2B1O00754 1011 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 LAMTOR5O43504 91 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 NDST3O95803 873 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 PROCP04070 461 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 BGNP21810 368 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 POU4F1Q01851 419 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 FCHO2Q0JRZ9 810 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 MSLNQ13421 630 aaPredicted RBP16.34■□□□□ 0.21
CBX4-204ENST00000495122 INO80DQ53TQ3 878 aaPredicted RBP16.34■□□□□ 0.21
CBX4-204ENST00000495122 GPR158Q5T848 1215 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 N4BP2L1Q5TBK1 243 aaPredicted RBP16.34■□□□□ 0.21
CBX4-204ENST00000495122 IL31Q6EBC2 164 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 RFWD3Q6PCD5 774 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 TMEM150AQ86TG1 271 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 CIR1Q86X95 450 aaPredicted RBP16.34■□□□□ 0.21
CBX4-204ENST00000495122 ARID3BQ8IVW6 561 aaPredicted RBP16.34■□□□□ 0.21
CBX4-204ENST00000495122 TUBB6Q9BUF5 446 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 RNF38Q9H0F5 515 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 ATXN3LQ9H3M9 355 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 STN1Q9H668 368 aaKnown RBP16.34■□□□□ 0.21
CBX4-204ENST00000495122 SLCO1B3Q9NPD5 702 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 PRMT8Q9NR22 394 aaPredicted RBP16.34■□□□□ 0.21
CBX4-204ENST00000495122 THAP1Q9NVV9 213 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 ZMYM5Q9UJ78 669 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 TLK1Q9UKI8 766 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 PIAS3Q9Y6X2 628 aa16.34■□□□□ 0.21
CBX4-204ENST00000495122 C2orf78A6NCI8 922 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 SNNO75324 88 aaPredicted RBP16.33■□□□□ 0.2
CBX4-204ENST00000495122 SNUPNO95149 360 aaKnown RBP16.33■□□□□ 0.2
CBX4-204ENST00000495122 VAPBO95292 243 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 LMNAP02545 664 aaKnown RBP16.33■□□□□ 0.2
CBX4-204ENST00000495122 ATXN1LP0C7T5 689 aaKnown RBP16.33■□□□□ 0.2
CBX4-204ENST00000495122 PSMA3P25788 255 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 WEE1P30291 646 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 SCTRP47872 440 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 CD151P48509 253 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 TMPRSS15P98073 1019 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 CYP4F8P98187 520 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 OCRLQ01968 901 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 TSNAXIP1Q2TAA8 658 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 ARHGAP15Q53QZ3 475 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 SIRPB2Q5JXA9 342 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 NEPROQ6NW34 567 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 HTR3DQ70Z44 454 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 PGBD5Q8N414 524 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 BRSK1Q8TDC3 778 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 USP13Q92995 863 aaPredicted RBP16.33■□□□□ 0.2
CBX4-204ENST00000495122 MYEOVQ96EZ4 313 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 TSPAN17Q96FV3 270 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 NUDCD1Q96RS6 583 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 AGAP2Q99490 1192 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 TXLNGQ9NUQ3 528 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 KCNK4Q9NYG8 393 aa16.33■□□□□ 0.2
CBX4-204ENST00000495122 NDRG2Q9UN36 371 aaKnown RBP16.33■□□□□ 0.2
CBX4-204ENST00000495122 A0A087X1B8 175 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms