RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 UGT1A5P35504 534 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 CCDC81Q6ZN84 652 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 TAF8Q7Z7C8 310 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 LZTR1Q8N653 840 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 AOPEPQ8N6M6 819 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 SPOCK2Q92563 424 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 ZNF599Q96NL3 588 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.32■■□□□ 1.32
COL27A1-208ENST00000494780 ANKRD36A6QL64 1941 aa23.31■■□□□ 1.32
COL27A1-208ENST00000494780 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.31■■□□□ 1.32
COL27A1-208ENST00000494780 FTLP02792 175 aaPredicted RBP23.31■■□□□ 1.32
COL27A1-208ENST00000494780 GM2AP17900 193 aa23.31■■□□□ 1.32
COL27A1-208ENST00000494780 DPYSQ14117 519 aa23.31■■□□□ 1.32
COL27A1-208ENST00000494780 LBRQ14739 615 aaKnown RBP23.31■■□□□ 1.32
COL27A1-208ENST00000494780 ASIC2Q16515 512 aa23.31■■□□□ 1.32
COL27A1-208ENST00000494780 TMCO4Q5TGY1 634 aa23.31■■□□□ 1.32
COL27A1-208ENST00000494780 CCNJLQ8IV13 435 aa23.31■■□□□ 1.32
COL27A1-208ENST00000494780 FAM46DQ8NEK8 389 aa23.31■■□□□ 1.32
COL27A1-208ENST00000494780 FOXP3Q9BZS1 431 aa23.31■■□□□ 1.32
COL27A1-208ENST00000494780 TRIM7Q9C029 511 aa23.31■■□□□ 1.32
COL27A1-208ENST00000494780 HAUS4Q9H6D7 363 aa23.31■■□□□ 1.32
COL27A1-208ENST00000494780 WDR26Q9H7D7 661 aa23.31■■□□□ 1.32
COL27A1-208ENST00000494780 RTN4Q9NQC3 1192 aaKnown RBP23.31■■□□□ 1.32
COL27A1-208ENST00000494780 CWC15Q9P013 229 aaKnown RBP23.31■■□□□ 1.32
COL27A1-208ENST00000494780 CNOT8Q9UFF9 292 aaKnown RBP23.31■■□□□ 1.32
COL27A1-208ENST00000494780 A0A1W2PQ67 120 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 GOLGA6L22H0YM25 854 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 PDE2AO00408 941 aaPredicted RBP23.3■■□□□ 1.32
COL27A1-208ENST00000494780 NOBOXO60393 691 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 LRCH4O75427 683 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 SLC5A2P31639 672 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 ACOX1Q15067 660 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 ZSCAN23Q3MJ62 389 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 CERCAMQ5T4B2 595 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 CCDC183Q5T5S1 534 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 PNCKQ6P2M8 343 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 NSMCE3Q96MG7 304 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 CCNL2Q96S94 520 aaPredicted RBP23.3■■□□□ 1.32
COL27A1-208ENST00000494780 NAT10Q9H0A0 1025 aaKnown RBP23.3■■□□□ 1.32
COL27A1-208ENST00000494780 ZWILCHQ9H900 591 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 MRPL40Q9NQ50 206 aaKnown RBP23.3■■□□□ 1.32
COL27A1-208ENST00000494780 KCTD5Q9NXV2 234 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 AIPL1Q9NZN9 384 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 ACSL6Q9UKU0 697 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 SCINQ9Y6U3 715 aa23.3■■□□□ 1.32
COL27A1-208ENST00000494780 HSPA9P38646 679 aaKnown RBP23.29■■□□□ 1.32
COL27A1-208ENST00000494780 ANP32AP39687 249 aaKnown RBP23.29■■□□□ 1.32
COL27A1-208ENST00000494780 PRKCIP41743 596 aa23.29■■□□□ 1.32
COL27A1-208ENST00000494780 SLC10A7Q0GE19 358 aa23.29■■□□□ 1.32
COL27A1-208ENST00000494780 TSR1Q2NL82 804 aaKnown RBP23.29■■□□□ 1.32
COL27A1-208ENST00000494780 C14orf28Q4W4Y0 310 aa23.29■■□□□ 1.32
COL27A1-208ENST00000494780 ZNF571Q7Z3V5 609 aaPredicted RBP23.29■■□□□ 1.32
COL27A1-208ENST00000494780 Q8N9G6 341 aaPredicted RBP23.29■■□□□ 1.32
COL27A1-208ENST00000494780 COQ10AQ96MF6 247 aa23.29■■□□□ 1.32
COL27A1-208ENST00000494780 LGR4Q9BXB1 951 aa23.29■■□□□ 1.32
COL27A1-208ENST00000494780 TMEM168Q9H0V1 697 aa23.29■■□□□ 1.32
COL27A1-208ENST00000494780 CYP4F12Q9HCS2 524 aa23.29■■□□□ 1.32
COL27A1-208ENST00000494780 B4GALT6Q9UBX8 382 aa23.29■■□□□ 1.32
COL27A1-208ENST00000494780 ATXN7L1Q9ULK2 861 aaPredicted RBP23.29■■□□□ 1.32
COL27A1-208ENST00000494780 A8MX80 341 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 H3BRJ5 948 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 HTRA2O43464 458 aaPredicted RBP23.28■■□□□ 1.32
COL27A1-208ENST00000494780 SOCS5O75159 536 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 PCK1P35558 622 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 TYRO3Q06418 890 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 LY6DQ14210 128 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 HLTFQ14527 1009 aaKnown RBP eCLIP23.28■■□□□ 1.321e-7■□□□□ 10.8
COL27A1-208ENST00000494780 ZNF235Q14590 738 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 JAMLQ86YT9 394 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 TP53INP2Q8IXH6 220 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 TMEM159Q96B96 161 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 ZNF653Q96CK0 615 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 TRIM11Q96F44 468 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 DPEP2Q9H4A9 486 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 MRPL47Q9HD33 250 aaKnown RBP23.28■■□□□ 1.32
COL27A1-208ENST00000494780 LRIT1Q9P2V4 623 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 MOSPD1Q9UJG1 213 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 LOXL2Q9Y4K0 774 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 RNF215Q9Y6U7 377 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 COL6A6A6NMZ7 2263 aa23.28■■□□□ 1.32
COL27A1-208ENST00000494780 PRSS38A1L453 326 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 B4DGG1 531 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 DDX3XO00571 662 aaKnown RBP eCLIP23.27■■□□□ 1.32
COL27A1-208ENST00000494780 NUDT21O43809 227 aaKnown RBP23.27■■□□□ 1.32
COL27A1-208ENST00000494780 ZIC2O95409 532 aaPredicted RBP23.27■■□□□ 1.32
COL27A1-208ENST00000494780 MBD3O95983 291 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 JMJD7P0C870 316 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 MYBL1P10243 752 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 MYCLP1P12525 358 aaPredicted RBP23.27■■□□□ 1.32
COL27A1-208ENST00000494780 HGFP14210 728 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 CR2P20023 1033 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 NFKBIAP25963 317 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 ARL4AP40617 200 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 ZFP36L1Q07352 338 aaKnown RBP23.27■■□□□ 1.32
COL27A1-208ENST00000494780 ARHGEF7Q14155 803 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 DPYSL2Q16555 572 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 FILIP1LQ4L180 1135 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 KIAA1614Q5VZ46 1190 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 SPECC1LQ69YQ0 1117 aa23.27■■□□□ 1.32
COL27A1-208ENST00000494780 SPRED1Q7Z699 444 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms