RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TCTN1Q2MV58 587 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 C2orf68Q2NKX9 166 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 KLHL35Q6PF15 583 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 CCDC129Q6ZRS4 1044 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 SLC35F3Q8IY50 421 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 PELI3Q8N2H9 469 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 ZBTB2Q8N680 514 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 TEX45Q8NA69 505 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 MPLKIPQ8TAP9 179 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 HIPK2Q9H2X6 1198 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 KRCC1Q9NPI7 259 aaPredicted RBP4.57□□□□□ -1.68
SMC4-224ENST00000494612 DDX4Q9NQI0 724 aaKnown RBP4.57□□□□□ -1.68
SMC4-224ENST00000494612 TERF2IPQ9NYB0 399 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 EHD2Q9NZN4 543 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 ADD3Q9UEY8 706 aaKnown RBP4.57□□□□□ -1.68
SMC4-224ENST00000494612 TBC1D29Q9UFV1 150 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 RSF1Q96T23 1441 aaPredicted RBP4.56□□□□□ -1.68
SMC4-224ENST00000494612 A0A0U1RQF3 1178 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 FAM237AA0A1B0GTK4 181 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 LIPT2A6NK58 231 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 PAGE4O60829 102 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 MTA2O94776 668 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 SCGB1D1O95968 90 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 LDHCP07864 332 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 ARSBP15848 533 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 DRAP1Q14919 205 aaPredicted RBP4.56□□□□□ -1.68
SMC4-224ENST00000494612 TOMM20Q15388 145 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 MMEL1Q495T6 779 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 SGO1Q5FBB7 561 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 FNBP1LQ5T0N5 605 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 QSOX2Q6ZRP7 698 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 Q6ZTC4 211 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 HUS1BQ8NHY5 278 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 CREB3L4Q8TEY5 395 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 ARHGEF2Q92974 986 aaKnown RBP4.56□□□□□ -1.68
SMC4-224ENST00000494612 FBXL8Q96CD0 374 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 URB1-AS1Q96HZ7 61 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 CMTM3Q96MX0 182 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 CATSPERBQ9H7T0 1116 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 KAT14Q9H8E8 782 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 SLC28A3Q9HAS3 691 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 GPR108Q9NPR9 543 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 RRP7BPQ9NSQ0 103 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 TMEM51Q9NW97 253 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 HCFC1R1Q9NWW0 138 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 SLCO3A1Q9UIG8 710 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 GPR34Q9UPC5 381 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 PTGDR2Q9Y5Y4 395 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 CEPT1Q9Y6K0 416 aa4.56□□□□□ -1.68
SMC4-224ENST00000494612 GAGE12JA6NER3 117 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 MYO1GB0I1T2 1018 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 B4DGG1 531 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 MS4A18H0YCH9 400 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 J3KR12 359 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 GJB3O75712 270 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 CLTBP09497 229 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 G6PDP11413 515 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 PSMA4P25789 261 aaKnown RBP4.55□□□□□ -1.68
SMC4-224ENST00000494612 CDAP32320 146 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 CLCN3P51790 818 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 NAP1L1P55209 391 aaKnown RBP4.55□□□□□ -1.68
SMC4-224ENST00000494612 FOXD4Q12950 439 aaPredicted RBP4.55□□□□□ -1.68
SMC4-224ENST00000494612 NAE1Q13564 534 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 CTTNQ14247 550 aaKnown RBP4.55□□□□□ -1.68
SMC4-224ENST00000494612 HNF4GQ14541 408 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 GKAP1Q5VSY0 366 aaPredicted RBP4.55□□□□□ -1.68
SMC4-224ENST00000494612 NCAPH2Q6IBW4 605 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 NCEH1Q6PIU2 408 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 TRILQ7L0X0 811 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 FASTKD5Q7L8L6 764 aaKnown RBP4.55□□□□□ -1.68
SMC4-224ENST00000494612 CCDC105Q8IYK2 499 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 OR14L1PQ8NHC6 308 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 BICD2Q8TD16 824 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 SCFD2Q8WU76 684 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 FAM149B1Q96BN6 582 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 CENPOQ9BU64 300 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 C1QTNF5Q9BXJ0 243 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 FAM234AQ9H0X4 552 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 MUC13Q9H3R2 512 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 CLK4Q9HAZ1 481 aaKnown RBP4.55□□□□□ -1.68
SMC4-224ENST00000494612 PLAC1Q9HBJ0 212 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 ASAH2Q9NR71 780 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 OR6C3Q9NZP0 311 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 DLGAP2Q9P1A6 1054 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 RCOR1Q9UKL0 485 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 NFE2L3Q9Y4A8 694 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 SRPRBQ9Y5M8 271 aaKnown RBP4.55□□□□□ -1.68
SMC4-224ENST00000494612 LYVE1Q9Y5Y7 322 aa4.55□□□□□ -1.68
SMC4-224ENST00000494612 A0A1W2PQF6 199 aa4.54□□□□□ -1.68
SMC4-224ENST00000494612 C1orf226A1L170 272 aa4.54□□□□□ -1.68
SMC4-224ENST00000494612 INAFM1C9JVW0 142 aa4.54□□□□□ -1.68
SMC4-224ENST00000494612 H3BQ06 376 aaPredicted RBP4.54□□□□□ -1.68
SMC4-224ENST00000494612 RGS14O43566 566 aa4.54□□□□□ -1.68
SMC4-224ENST00000494612 KRT86O43790 486 aa4.54□□□□□ -1.68
SMC4-224ENST00000494612 MMP2P08253 660 aa4.54□□□□□ -1.68
SMC4-224ENST00000494612 CYC1P08574 325 aa4.54□□□□□ -1.68
SMC4-224ENST00000494612 HOXB2P14652 356 aa4.54□□□□□ -1.68
SMC4-224ENST00000494612 AGAP20933 346 aa4.54□□□□□ -1.68
SMC4-224ENST00000494612 MT3P25713 68 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms