RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CCNG2Q16589 344 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 LONRF2Q1L5Z9 754 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 HLA-BQ31612 363 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 ITPRIPL1Q6GPH6 555 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 CRTC1Q6UUV9 634 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 IL27RAQ6UWB1 636 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 ABI3BPQ7Z7G0 1075 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 MINDY1Q8N5J2 469 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 TP53I13Q8NBR0 393 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-208ENST00000494334 MAIP1Q8WWC4 291 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 RMDN1Q96DB5 314 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 KLHDC7BQ96G42 594 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 MRGPRX2Q96LB1 330 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 LYSMD1Q96S90 227 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 GORASP1Q9BQQ3 440 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 MLPHQ9BV36 600 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-208ENST00000494334 ADGRE3Q9BY15 652 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 GBA3Q9H227 469 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 TMEM9BQ9NQ34 198 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 MBNL1Q9NR56 388 aaKnown RBP13.58□□□□□ -0.24
COL1A1-208ENST00000494334 DOCK9Q9BZ29 2069 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 PI4KAP42356 2102 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 ANKRD36A6QL64 1941 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 LOC285095A0A1B0GVY8 99 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 CAPN8A6NHC0 703 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 GOLGA8CPA6NN73 597 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 C4orf47A7E2U8 309 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 FPGTO14772 594 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 MAGEC1O60732 1142 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 OPHN1O60890 802 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 GCATO75600 419 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 THEGLP0DJG4 465 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 PSMB4P28070 264 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 IGFALSP35858 605 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 LIMK1P53667 647 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 WNT3AP56704 352 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 NXPH1P58417 271 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 GNG11P61952 73 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 PTSQ03393 145 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 MPP3Q13368 585 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 SNX1Q13596 522 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 ARHGEF7Q14155 803 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 LRRC14Q15048 493 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 ACOX1Q15067 660 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 CDKN3Q16667 212 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 WSCD2Q2TBF2 565 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 PRAMEF14Q5SWL7 426 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 STPG1Q5TH74 334 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 LRRC66Q68CR7 880 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 DENND2CQ68D51 928 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 KYAT3Q6YP21 454 aaKnown RBP13.57□□□□□ -0.24
COL1A1-208ENST00000494334 KDM7AQ6ZMT4 941 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 Q6ZSR6 202 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 SPATS2Q86XZ4 545 aaKnown RBP13.57□□□□□ -0.24
COL1A1-208ENST00000494334 OR13H1Q8NG92 308 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 FAM174AQ8TBP5 190 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 NETO1Q8TDF5 533 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 COG1Q8WTW3 980 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 RTP4Q96DX8 246 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 IFT43Q96FT9 208 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 MS4A14Q96JA4 679 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 COQ10AQ96MF6 247 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 WDR24Q96S15 920 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 OSBPL9Q96SU4 736 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 C1QTNF7Q9BXJ2 289 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 GAREM1Q9H706 876 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 IL21RQ9HBE5 538 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 TTC7AQ9ULT0 858 aaPredicted RBP13.57□□□□□ -0.24
COL1A1-208ENST00000494334 SNX12Q9UMY4 172 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 ZNF148Q9UQR1 794 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 ZKSCAN5Q9Y2L8 839 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 PLXNA2O75051 1894 aa13.57□□□□□ -0.24
COL1A1-208ENST00000494334 PCDH15Q96QU1 1955 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 DNAH14Q0VDD8 3507 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 A6NNZ2 444 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 PSMD11O00231 422 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 CLDN7O95471 211 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 METTL18O95568 372 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 NDST3O95803 873 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 EPOP01588 193 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 ATXN1LP0C7T5 689 aaKnown RBP13.56□□□□□ -0.24
COL1A1-208ENST00000494334 ZNF30P17039 623 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 ETV3P41162 512 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 GEMP55040 296 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 PFN3P60673 137 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 IRF4Q15306 451 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 RSPO4Q2I0M5 234 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-208ENST00000494334 PARP6Q2NL67 630 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 DRICH1Q6PGQ1 229 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-208ENST00000494334 HSD11B1LQ7Z5J1 315 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 TECPR1Q7Z6L1 1165 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 SLC22A18ASQ8N1D0 253 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 C17orf53Q8N3J3 647 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-208ENST00000494334 IPMKQ8NFU5 416 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 GPR27Q9NS67 375 aa13.56□□□□□ -0.24
COL1A1-208ENST00000494334 DNAAF2Q9NVR5 837 aaKnown RBP13.56□□□□□ -0.24
COL1A1-208ENST00000494334 DRG1Q9Y295 367 aaKnown RBP13.56□□□□□ -0.24
COL1A1-208ENST00000494334 AAR2Q9Y312 384 aaKnown RBP13.56□□□□□ -0.24
COL1A1-208ENST00000494334 ANXA9O76027 345 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms