RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 IL12RB2Q99665 862 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 MGME1Q9BQP7 344 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 DUSP23Q9BVJ7 150 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 BOCQ9BWV1 1114 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 LGR4Q9BXB1 951 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 SLC13A1Q9BZW2 595 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 NT5MQ9NPB1 228 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 MRPL40Q9NQ50 206 aaKnown RBP8.57□□□□□ -1.04
LRCH3-219ENST00000494069 SPTLC3Q9NUV7 552 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 SIRPGQ9P1W8 387 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 CTTNBP2NLQ9P2B4 639 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 SALL4Q9UJQ4 1053 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.57□□□□□ -1.041e-8■□□□□ 10.1
LRCH3-219ENST00000494069 ITPR1Q14643 2758 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 ADAMTS20P59510 1910 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 A0A1W2PNU3 283 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-219ENST00000494069 PMS2P1A4D2B8 440 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 NPIPB15A6NHN6 443 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-219ENST00000494069 LMO7DNF2Z398 122 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 TOR1BO14657 336 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 TPP1O14773 563 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 BRINP1O60477 761 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 CSO75390 466 aaKnown RBP8.56□□□□□ -1.04
LRCH3-219ENST00000494069 RASGRP1O95267 797 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 CPP00450 1065 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 MPOP05164 745 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 ANXA6P08133 673 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 PDHA1P08559 390 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 ALPIP09923 528 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 H2AFZP0C0S5 128 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 CTPS1P17812 591 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 MMP13P45452 471 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 PEX5P50542 639 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 SRP54P61011 504 aaKnown RBP8.56□□□□□ -1.04
LRCH3-219ENST00000494069 DSC2Q02487 901 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 GBE1Q04446 702 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 GALNT2Q10471 571 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 SLC10A2Q12908 348 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-219ENST00000494069 MTM1Q13496 603 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 MESDQ14696 234 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 ACOX1Q15067 660 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 AGERQ15109 404 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 NR0B2Q15466 257 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 CNGA3Q16281 694 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 HADHQ16836 314 aaKnown RBP8.56□□□□□ -1.04
LRCH3-219ENST00000494069 TSR1Q2NL82 804 aaKnown RBP8.56□□□□□ -1.04
LRCH3-219ENST00000494069 ANKRD20A8PQ5CZ79 823 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 MARC1Q5VT66 337 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 SPECC1LQ69YQ0 1117 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 PNCKQ6P2M8 343 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 H2AFVQ71UI9 128 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 TSPAN33Q86UF1 283 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 CACTIN-AS1Q8N1I8 211 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 CBARPQ8N350 705 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-219ENST00000494069 TEX26Q8N6G2 289 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 KCTD6Q8NC69 237 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 OR8K1Q8NGG5 319 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 CCL4L1Q8NHW4 92 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 PIH1D2Q8WWB5 315 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 KCTD12Q96CX2 325 aaKnown RBP8.56□□□□□ -1.04
LRCH3-219ENST00000494069 COQ10AQ96MF6 247 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 DNAJC7Q99615 494 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 SEMA3CQ99985 751 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 NRSN2Q9GZP1 204 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 ABCG4Q9H172 646 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 FGF22Q9HCT0 170 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 GULP1Q9UBP9 304 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 KLQ9UEF7 1012 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 RABGEF1Q9UJ41 708 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 LOC400499M0QZD8 3231 aa8.56□□□□□ -1.04
LRCH3-219ENST00000494069 FAM208BQ5VWN6 2430 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 RP1P56715 2156 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 A0A087WV48 116 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 CFAP69A5D8W1 941 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 SOCS5O75159 536 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 USP12O75317 370 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 HEXIM1O94992 359 aaKnown RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 PGLSO95336 258 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 TNFP01375 233 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 FUCA1P04066 466 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 GP1BAP07359 652 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 TMEM253P0C7T8 217 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 CTSEP14091 401 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 HTR1BP28222 390 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 VIPR1P32241 457 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 TRIM23P36406 574 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 HSPA9P38646 679 aaKnown RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 EIF2S3P41091 472 aaKnown RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 ETV3P41162 512 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 GARSP41250 739 aaKnown RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 DUSP3P51452 185 aaPredicted RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 POLR2LP62875 67 aaKnown RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 ITKQ08881 620 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 NIPAL4Q0D2K0 466 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 PAFAH1B3Q15102 231 aaKnown RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 SKOR2Q2VWA4 1001 aaPredicted RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 Q6ZVL8 140 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 B4GALNT4Q76KP1 1039 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 PDZD3Q86UT5 571 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms