RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 MNTQ99583 582 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 FUNDC2Q9BWH2 189 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 COA1Q9GZY4 146 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 NUAK2Q9H093 628 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 MAGEF1Q9HAY2 307 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 TAS2R9Q9NYW1 312 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 KIF17Q9P2E2 1029 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 AFF4Q9UHB7 1163 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 COPS3Q9UNS2 423 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ACTL7AQ9Y615 435 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 CYP3A7-CYP3A51PA0A087WV96 503 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 FAM92AA1XBS5 289 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 FAM149AA5PLN7 773 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 SDR42E2A6NKP2 422 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 YDJCA8MPS7 323 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ZBTB39O15060 712 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 SGCEO43556 437 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 GREM1O60565 184 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PTP4A3O75365 173 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PTTG1O95997 202 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 IMPDH1P20839 514 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 CYP3A7P24462 503 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ARSEP51690 589 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 MRPS5P82675 430 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 MERTKQ12866 999 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ALCAMQ13740 583 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 DSG2Q14126 1118 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 DGCR6Q14129 220 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 HIF1AQ16665 826 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 MFSD14BQ5SR56 506 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF517Q6ZMY9 492 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PPM1NQ8N819 430 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 FAM71DQ8N9W8 422 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ENKURQ8TC29 256 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 GAL3ST1Q99999 423 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 C7orf25Q9BPX7 421 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ASPSCR1Q9BZE9 553 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 OSGEPL1Q9H4B0 414 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PPCSQ9HAB8 311 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ARNT2Q9HBZ2 717 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 KCND2Q9NZV8 630 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 OGDHLQ9ULD0 1010 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PRPF19Q9UMS4 504 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 COG5Q9UP83 839 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PTGES3LE9PB15 166 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PDHXO00330 501 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 B4GAT1O43505 415 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 CCNE2O96020 404 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 S100A9P06702 114 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 SLURP2P0DP57 97 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 SCNN1GP51170 649 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 DGKQP52824 942 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 RAB14P61106 215 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 CSNK2BP67870 215 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 MS4A2Q01362 244 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 CACNB1Q02641 598 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 FAAP100Q0VG06 881 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 HYIQ5T013 277 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 TEDDM1Q5T9Z0 273 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 TATDN1Q6P1N9 297 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 KRT74Q7RTS7 529 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PRSS42Q7Z5A4 293 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 CPNE8Q86YQ8 564 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 SVOPQ8N4V2 548 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 FNDC5Q8NAU1 212 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 OR13F1Q8NGS4 319 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PIWIL2Q8TC59 973 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 RIPOR3Q96MK2 946 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 NAP1L4Q99733 375 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 NAT9Q9BTE0 207 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 TMEM168Q9H0V1 697 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 SOX17Q9H6I2 414 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 GPN2Q9H9Y4 310 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 WDR41Q9HAD4 459 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 CATSPERZQ9NTU4 200 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 HPF1Q9NWY4 346 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 BARHL2Q9NY43 387 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 EVLQ9UI08 416 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PRELID3BQ9Y3B1 194 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF236Q9UL36 1845 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 MYMKA6NI61 221 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 PRMT3O60678 531 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 NTRK1P04629 796 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ATP5BP06576 529 aaKnown RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 HEXBP07686 556 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ZSCAN5DPP0CG00 497 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 NCAM1P13591 858 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 MTHFRP42898 656 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 PCP4P48539 62 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 PLA2G16P53816 162 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 GPC5P78333 572 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 STX5Q13190 355 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF568Q3ZCX4 644 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 PTPN20Q4JDL3 420 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 DACT2Q5SW24 774 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 BRAT1Q6PJG6 821 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 COMMD7Q86VX2 200 aa6.87□□□□□ -1.31
VPS13B-205ENST00000493587 SPATA2LQ8IUW3 424 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-205ENST00000493587 TMEM102Q8N9M5 508 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms