RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 SGMS1Q86VZ5 419 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 AMER2Q8N7J2 671 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 PTP4A1Q93096 173 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 ZNF622Q969S3 477 aaKnown RBP eCLIP5.37□□□□□ -1.55
SND1-216ENST00000492840 FUBP1Q96AE4 644 aaKnown RBP5.37□□□□□ -1.55
SND1-216ENST00000492840 TBC1D31Q96DN5 1066 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 PABPC5Q96DU9 382 aaKnown RBP5.37□□□□□ -1.55
SND1-216ENST00000492840 KAZALD1Q96I82 304 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 HS6ST2Q96MM7 605 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 KIFC3Q9BVG8 833 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 CCDC106Q9BWC9 280 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 FAM129AQ9BZQ8 928 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 XPO4Q9C0E2 1151 aaKnown RBP5.37□□□□□ -1.55
SND1-216ENST00000492840 PLK3Q9H4B4 646 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 ZNF768Q9H5H4 540 aaKnown RBP5.37□□□□□ -1.55
SND1-216ENST00000492840 PDZD7Q9H5P4 517 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 Q9N2J8 555 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 ASAH2Q9NR71 780 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 SETD4Q9NVD3 440 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 ARL15Q9NXU5 204 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 COQ3Q9NZJ6 369 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 NLKQ9UBE8 527 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 CTNNAL1Q9UBT7 734 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 ZFR2Q9UPR6 939 aaKnown RBP5.37□□□□□ -1.55
SND1-216ENST00000492840 BTBD3Q9Y2F9 522 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 CLDN16Q9Y5I7 305 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 POMT1Q9Y6A1 747 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 RNF123Q5XPI4 1314 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 ZNF541Q9H0D2 1346 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 RTL1A6NKG5 1358 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 CACNA1SQ13698 1873 aa5.37□□□□□ -1.55
SND1-216ENST00000492840 MYH14Q7Z406 1995 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 CEP290O15078 2479 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 GAGE12BA1L429 117 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 GAGE12HA6NDE8 117 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 VWC2LB2RUY7 222 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 H0YIN7 160 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 RNASET2O00584 256 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 CYP27B1O15528 508 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 PROM1O43490 865 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 LAMTOR5O43504 91 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 HCRTR2O43614 444 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 PRICKLE3O43900 615 aaPredicted RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 SYNCRIPO60506 623 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 LPXNO60711 386 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 MITFO75030 526 aaPredicted RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 NDUFS3O75489 264 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 NXPH3O95157 252 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 FTCDO95954 541 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 SERPINC1P01008 464 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 SRPRAP08240 638 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 IRF1P10914 325 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 FDPSP14324 419 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 PCSK6P29122 969 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 HOXC8P31273 242 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 MCM7P33993 719 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 GABRB2P47870 512 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 POLGP54098 1239 aaPredicted RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 OLIG2Q13516 323 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 NFE2L1Q14494 772 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 IL11RAQ14626 422 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 SF3B3Q15393 1217 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 CNGA3Q16281 694 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 EDRF1Q3B7T1 1238 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 ZSCAN23Q3MJ62 389 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 DNAJC21Q5F1R6 531 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 MPP7Q5T2T1 576 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 KIRREL2Q6UWL6 708 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 RBPMS2Q6ZRY4 209 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 MMP21Q8N119 569 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 XXYLT1Q8NBI6 393 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 SPC24Q8NBT2 197 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 RP9Q8TA86 221 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 GRK7Q8WTQ7 553 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 CCDC47Q96A33 483 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 ARHGEF26Q96DR7 871 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 CFAP57Q96MR6 1250 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 OR2A14Q96R47 310 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 ADAM2Q99965 735 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 PI4K2AQ9BTU6 479 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 ALG8Q9BVK2 526 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 HRH4Q9H3N8 390 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 KIF9Q9HAQ2 790 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 AKIP1Q9NQ31 210 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 PFDN4Q9NQP4 134 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 TMOD3Q9NYL9 352 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 EHD3Q9NZN3 535 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 SEMA5BQ9P283 1151 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 CNOT8Q9UFF9 292 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 TUBE1Q9UJT0 475 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 OSGIN1Q9UJX0 560 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 PA2G4Q9UQ80 394 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 DTX4Q9Y2E6 619 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.36□□□□□ -1.55
SND1-216ENST00000492840 REXO2Q9Y3B8 237 aaKnown RBP5.36□□□□□ -1.55
SND1-216ENST00000492840 XDHP47989 1333 aa5.36□□□□□ -1.55
SND1-216ENST00000492840 ANKRD31Q8N7Z5 1873 aa5.35□□□□□ -1.55
SND1-216ENST00000492840 CARMIL3Q8ND23 1372 aa5.35□□□□□ -1.55
SND1-216ENST00000492840 EVC2Q86UK5 1308 aa5.35□□□□□ -1.55
SND1-216ENST00000492840 LOC100509620A0A075B734 347 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms