RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 INSIG1O15503 277 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 RNF8O76064 485 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 RECQL5O94762 991 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-212ENST00000492407 PIGNO95427 931 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 RPLP0P05388 317 aaKnown RBP9.17□□□□□ -0.94
HDAC3-212ENST00000492407 SFTPCP11686 197 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 GZMAP12544 262 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 ITIH2P19823 946 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 CD82P27701 267 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 UGT1A5P35504 534 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 PAPOLAP51003 745 aaKnown RBP9.17□□□□□ -0.94
HDAC3-212ENST00000492407 UBXN1Q04323 297 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 MAMLD1Q13495 774 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 LRRC73Q5JTD7 316 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 CERCAMQ5T4B2 595 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 SASS6Q6UVJ0 657 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 LIPIQ6XZB0 460 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 RFX8Q6ZV50 586 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 IRF2BP2Q7Z5L9 587 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 C17orf82Q86X59 251 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-212ENST00000492407 CAMK1DQ8IU85 385 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 KYQ8NBH2 561 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 KIAA1524Q8TCG1 905 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 TSACCQ96A04 125 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-212ENST00000492407 FUBP1Q96AE4 644 aaKnown RBP9.17□□□□□ -0.94
HDAC3-212ENST00000492407 SLC39A8Q9C0K1 460 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 LMBRD1Q9NUN5 540 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 SEPT11Q9NVA2 429 aaKnown RBP9.17□□□□□ -0.94
HDAC3-212ENST00000492407 SEPT10Q9P0V9 454 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 SEPT3Q9UH03 358 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 AP4E1Q9UPM8 1137 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 OR1A2Q9Y585 309 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 ASH1LQ9NR48 2969 aaKnown RBP9.17□□□□□ -0.94
HDAC3-212ENST00000492407 MGAQ8IWI9 3026 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 DOCK9Q9BZ29 2069 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 A0A1W2PQC6 194 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 FAM170AA1A519 330 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 TMEM191CA6NGB0 347 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 PSMD11O00231 422 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 DAPK3O43293 454 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-212ENST00000492407 SOCS5O75159 536 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 CELA2BP08218 269 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-212ENST00000492407 ELFN1P0C7U0 828 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 LIPCP11150 499 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 ERCC2P18074 760 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 TNFAIP3P21580 790 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 PSMA2P25787 234 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 SLC5A2P31639 672 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 PCK1P35558 622 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 CCL7P80098 99 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 RALGDSQ12967 914 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 SQSTM1Q13501 440 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 HLTFQ14527 1009 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDAC3-212ENST00000492407 NR1D2Q14995 579 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 C14orf28Q4W4Y0 310 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 BOLA3Q53S33 107 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 PNCKQ6P2M8 343 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 CRTC1Q6UUV9 634 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 APTXQ7Z2E3 356 aaKnown RBP9.16□□□□□ -0.94
HDAC3-212ENST00000492407 RD3Q7Z3Z2 195 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 TAF8Q7Z7C8 310 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 ZSWIM9Q86XI8 627 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 CCNJLQ8IV13 435 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 RAVER1Q8IY67 606 aaKnown RBP9.16□□□□□ -0.94
HDAC3-212ENST00000492407 CBARPQ8N350 705 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-212ENST00000492407 TSEN2Q8NCE0 465 aaKnown RBP9.16□□□□□ -0.94
HDAC3-212ENST00000492407 FAM46DQ8NEK8 389 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 GPBAR1Q8TDU6 330 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 OR1E3Q8WZA6 343 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 TRIM11Q96F44 468 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 EXOC2Q96KP1 924 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 CMKLR1Q99788 373 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 SEMA3CQ99985 751 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 DPYSL5Q9BPU6 564 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 SYT11Q9BT88 431 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 CINPQ9BW66 212 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-212ENST00000492407 WDR26Q9H7D7 661 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 ZWILCHQ9H900 591 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 EPB41L5Q9HCM4 733 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 TRNAU1APQ9NX07 287 aaKnown RBP9.16□□□□□ -0.94
HDAC3-212ENST00000492407 AKAP7Q9P0M2 348 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-212ENST00000492407 RABGEF1Q9UJ41 708 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 SCINQ9Y6U3 715 aa9.16□□□□□ -0.94
HDAC3-212ENST00000492407 ZNF462Q96JM2 2506 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 TMEM202A6NGA9 273 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 ESPNB1AK53 854 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-212ENST00000492407 HGSO14964 777 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-212ENST00000492407 PRPSAP2O60256 369 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 NOBOXO60393 691 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 IPO7O95373 1038 aaKnown RBP9.15□□□□□ -0.94
HDAC3-212ENST00000492407 PCCBP05166 539 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 JMJD7P0C870 316 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 MYBL1P10243 752 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 MYCLP1P12525 358 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-212ENST00000492407 KRT10P13645 584 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 GPR3P46089 330 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 OGDHQ02218 1023 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 TRA2AQ13595 282 aaKnown RBP eCLIP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms