RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 GCNAQ96QF7 691 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 PRKD2Q9BZL6 878 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 ZNF385DQ9H6B1 395 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 IL1RL2Q9HB29 575 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 ZBTB26Q9HCK0 441 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 GALPQ9UBC7 116 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 TCAF2A6NFQ2 919 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 AP3B1O00203 1094 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 H2AFYO75367 372 aaKnown RBP12.48□□□□□ -0.41
HMGN1-220ENST00000492280 NDST2P52849 883 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 TIAL1Q01085 375 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMGN1-220ENST00000492280 ART3Q13508 389 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 OR4D1Q15615 310 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 IRGCQ6NXR0 463 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 BNC2Q6ZN30 1099 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-220ENST00000492280 EFHBQ8N7U6 833 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 FAM110BQ8TC76 370 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 SPPL2BQ8TCT7 592 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 RMDN1Q96DB5 314 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 CCDC97Q96F63 343 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-220ENST00000492280 FUBP3Q96I24 572 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMGN1-220ENST00000492280 COPS7BQ9H9Q2 264 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-220ENST00000492280 TLR8Q9NR97 1041 aaKnown RBP12.48□□□□□ -0.41
HMGN1-220ENST00000492280 ADA2Q9NZK5 511 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 CORO1CQ9ULV4 474 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-220ENST00000492280 BTRCQ9Y297 605 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 PCDHGC4Q9Y5F7 938 aa12.48□□□□□ -0.41
HMGN1-220ENST00000492280 TBKBP1A7MCY6 615 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 THRAP10827 490 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 SLC2A3P11169 496 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 HOXD9P28356 352 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 CCNHP51946 323 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 YBX1P67809 324 aaKnown RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 MRPS35P82673 323 aaKnown RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 PFKPQ01813 784 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 PFKFB4Q16877 469 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 AGKQ53H12 422 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 FAM26DQ5JW98 314 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 AGAP9Q5VTM2 703 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 LRRC8DQ7L1W4 858 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 PIWIL4Q7Z3Z4 852 aaKnown RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 ISCA2Q86U28 154 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 PTGR2Q8N8N7 351 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 ZNF512Q96ME7 567 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 PRICKLE1Q96MT3 831 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 KLHL32Q96NJ5 620 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 POLR1EQ9GZS1 481 aaKnown RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 GSTO2Q9H4Y5 243 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 IGLV3-10A0A075B6K4 115 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 A0A087X1B8 175 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 MROH6A6NGR9 719 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 WASH4PA8MWX3 477 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 CBX4O00257 560 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 FKBP6O75344 327 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 EOMESO95936 686 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 FGFR3P22607 806 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 DNAJB2P25686 324 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 CLCN5P51795 746 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 CCL23P55773 120 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 GK3PQ14409 553 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 FBXL19Q6PCT2 694 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 PAOXQ6QHF9 649 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 CYP2R1Q6VVX0 501 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 PTCD2Q8WV60 388 aaKnown RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 LRCH3Q96II8 777 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 MRM3Q9HC36 420 aaKnown RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 POLR3BQ9NW08 1133 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-220ENST00000492280 XIRP2A4UGR9 3374 aa12.47□□□□□ -0.41
HMGN1-220ENST00000492280 F5H5T6 163 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 CD3EAPO15446 510 aaKnown RBP12.46□□□□□ -0.41
HMGN1-220ENST00000492280 COL6A2P12110 1019 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 CHRM3P20309 590 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 FMO4P31512 558 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 PRKAA2P54646 552 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 ZNF423Q2M1K9 1284 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 FAM117BQ6P1L5 589 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 SCIMPQ6UWF3 145 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 LILRA2Q8N149 483 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 OR4K2Q8NGD2 314 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 OR6K2Q8NGY2 324 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 RAET1EQ8TD07 263 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 UBXN10Q96LJ8 280 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 ANKRD27Q96NW4 1050 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 CASD1Q96PB1 797 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 SLC30A3Q99726 388 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 SEMA6AQ9H2E6 1030 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 ARNT2Q9HBZ2 717 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 ARHGEF37A1IGU5 675 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 ENPP3O14638 875 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 OR1I1O60431 355 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 SNAP91O60641 907 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 KLKB1P03952 638 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 LYNP07948 512 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 CST5P28325 142 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-220ENST00000492280 ATN1P54259 1190 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-220ENST00000492280 PIGGQ5H8A4 983 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 OR52E8Q6IFG1 317 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 KLC3Q6P597 504 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 DEFB128Q7Z7B8 93 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 KBTBD6Q86V97 674 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms