RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RPL6Q02878 288 aaKnown RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 MMRN1Q13201 1228 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 MORF4L2Q15014 288 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 CST6Q15828 149 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 CMPK2Q5EBM0 449 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 HHATQ5VTY9 493 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF776Q68DI1 518 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 DRICH1Q6PGQ1 229 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 POLNQ7Z5Q5 900 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 ARHGAP12Q8IWW6 846 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 AADATQ8N5Z0 425 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 NPWQ8N729 165 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 ENDOVQ8N8Q3 282 aaKnown RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 CHST14Q8NCH0 376 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 OR2A12Q8NGT7 310 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF398Q8TD17 642 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 TEKT4Q8WW24 435 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 VOPP1Q96AW1 172 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 LOXL4Q96JB6 756 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 TBC1D10AQ9BXI6 508 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 OSBPL1AQ9BXW6 950 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 SLC39A8Q9C0K1 460 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 FBRSQ9HAH7 460 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 PCDH18Q9HCL0 1135 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 SPATS2LQ9NUQ6 558 aaKnown RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 TMEM74BQ9NUR3 256 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 ZFATQ9P243 1243 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 SLC24A2Q9UI40 661 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 GMEB2Q9UKD1 530 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 LAMA1P25391 3075 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 PLXNA2O75051 1894 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 CFAP54Q96N23 3096 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 SHROOM3Q8TF72 1996 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 TJP3O95049 919 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 DNTTP04053 509 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 GCAP28676 217 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 HTR7P34969 479 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 RPA3P35244 121 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 GJC1P36383 396 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 SSR1P43307 286 aaKnown RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 PSMD8P48556 350 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 HCAR3P49019 387 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 CCNHP51946 323 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 MRPS35P82673 323 aaKnown RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 CREB5Q02930 508 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 SERINC3Q13530 473 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 TSNAXIP1Q2TAA8 658 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 SLC45A4Q5BKX6 768 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 PLA2G2CQ5R387 149 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 AFMIDQ63HM1 303 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 C22orf39Q6P5X5 142 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF449Q6P9G9 518 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ARHGAP36Q6ZRI8 547 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 LPCAT2Q7L5N7 544 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 KIAA2013Q8IYS2 634 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 C10orf82Q8WW14 230 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 SPOCK2Q92563 424 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 SLC7A6OSQ96CW6 309 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 RBM41Q96IZ5 413 aaKnown RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 FAM118BQ9BPY3 351 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 GPR174Q9BXC1 333 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 VPS37BQ9H9H4 285 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 SAR1AQ9NR31 198 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 KLHL11Q9NVR0 708 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 PSMC3IPQ9P2W1 217 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 NKX1-2Q9UD57 310 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF148Q9UQR1 794 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 DOCK9Q9BZ29 2069 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 A0A1W2PP55 124 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 BCLAF3A2AJT9 711 aaKnown RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 A6NHS1 94 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 J3KR12 359 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 MCF2LO15068 1137 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 LIASO43766 372 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ZWINTO95229 277 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 TROVE2P10155 538 aaKnown RBP eCLIP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ATP6V1C1P21283 382 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ITPKAP23677 461 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 PTPN4P29074 926 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 DRD3P35462 400 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ABL2P42684 1182 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 YBEYP58557 167 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ELAVL3Q14576 367 aaKnown RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 SEPT7Q16181 437 aaKnown RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 POM121L1PQ3SYA9 428 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ZFYVE27Q5T4F4 411 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 RETSATQ6NUM9 610 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 SLC36A4Q6YBV0 504 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 CENPUQ71F23 418 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 PRUNE1Q86TP1 453 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 C11orf74Q86VG3 221 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 APLFQ8IW19 511 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 RCOR2Q8IZ40 523 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 C4orf33Q8N1A6 199 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 CFAP61Q8NHU2 1237 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF419Q96HQ0 510 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 CSPG4P5Q96PW8 444 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 FAM167BQ9BTA0 163 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms