RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 DPEP2Q9H4A9 486 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 PDFQ9HBH1 243 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 CYP4F12Q9HCS2 524 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 NOCTQ9UK39 431 aaKnown RBP13.28□□□□□ -0.28
USF1-206ENST00000491629 MAN2B2Q9Y2E5 1009 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 ATP8A1Q9Y2Q0 1164 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 PCDHGA3Q9Y5H0 932 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 B3GALT1Q9Y5Z6 326 aa13.28□□□□□ -0.28
USF1-206ENST00000491629 TNRC6AQ8NDV7 1962 aaKnown RBP13.28□□□□□ -0.28
USF1-206ENST00000491629 J3KR12 359 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 TNFRSF10CO14798 259 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 DUX1O43812 170 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 CYP1A1P04798 512 aaPredicted RBP13.27□□□□□ -0.29
USF1-206ENST00000491629 HOXC4P09017 264 aaPredicted RBP13.27□□□□□ -0.29
USF1-206ENST00000491629 MMP8P22894 467 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 XPAP23025 273 aaPredicted RBP13.27□□□□□ -0.29
USF1-206ENST00000491629 CSF2RBP32927 897 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 CASRP41180 1078 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 MTIF2P46199 727 aaKnown RBP13.27□□□□□ -0.29
USF1-206ENST00000491629 FMO1Q01740 532 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 PTP4A2Q12974 167 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 MAP9Q49MG5 647 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 STRADAQ7RTN6 431 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 ZNF354CQ86Y25 554 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 DNAAF5Q86Y56 855 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 ATL2Q8NHH9 583 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 SLC30A5Q8TAD4 765 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 NTAN1Q96AB6 310 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 PSMG3-AS1Q96PY0 264 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 TAAR9Q96RI9 348 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 SPRY4Q9C004 299 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 NDST4Q9H3R1 872 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 TMEM9Q9P0T7 183 aa13.27□□□□□ -0.29
USF1-206ENST00000491629 TEP1Q99973 2627 aaKnown RBP13.27□□□□□ -0.29
USF1-206ENST00000491629 CRYBG3Q68DQ2 2970 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 PRSS38A1L453 326 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 WASH4PA8MWX3 477 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 HGSO14964 777 aaPredicted RBP13.26□□□□□ -0.29
USF1-206ENST00000491629 PPM1DO15297 605 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 NKX2-8O15522 239 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 NTRK1P04629 796 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 CCNB1P14635 433 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 MPSTP25325 297 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 AK4P27144 223 aaPredicted RBP13.26□□□□□ -0.29
USF1-206ENST00000491629 ALDH4A1P30038 563 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 SDC4P31431 198 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 RFC1P35251 1148 aaPredicted RBP13.26□□□□□ -0.29
USF1-206ENST00000491629 LIMK2P53671 638 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 YBEYP58557 167 aaPredicted RBP13.26□□□□□ -0.29
USF1-206ENST00000491629 MAN2A1Q16706 1144 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 NKAIN2Q5VXU1 208 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 BRAT1Q6PJG6 821 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 UMODL1-AS1Q8N2C9 162 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 ART4Q93070 314 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 ECHDC3Q96DC8 303 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 ZNF641Q96N77 438 aaPredicted RBP13.26□□□□□ -0.29
USF1-206ENST00000491629 NCAPGQ9BPX3 1015 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 C11orf70Q9BRQ4 267 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 CDH19Q9H159 772 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 LRRC19Q9H756 370 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 ZNF71Q9NQZ8 489 aaPredicted RBP13.26□□□□□ -0.29
USF1-206ENST00000491629 OCIAD1Q9NX40 245 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 TUBD1Q9UJT1 453 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 SHANK1Q9Y566 2161 aa13.26□□□□□ -0.29
USF1-206ENST00000491629 HIVEP3Q5T1R4 2406 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 CREBBPQ92793 2442 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 CFAP69A5D8W1 941 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 A8MX80 341 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 F8VZ95 297 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 CACNB4O00305 520 aaPredicted RBP13.25□□□□□ -0.29
USF1-206ENST00000491629 ECEL1O95672 775 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 CEACAM5P06731 702 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 UCHL3P15374 230 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 EPHB2P29323 1055 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 VWA3BQ502W6 1294 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 HSP90AA4PQ58FG1 418 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 TMEM164Q5U3C3 297 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 AFMIDQ63HM1 303 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 HIST2H2BCQ6DN03 193 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 ERAP2Q6P179 960 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 PNCKQ6P2M8 343 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 WDR59Q6PJI9 974 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 NAGSQ8N159 534 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 BMPERQ8N8U9 685 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 TSEN2Q8NCE0 465 aaKnown RBP13.25□□□□□ -0.29
USF1-206ENST00000491629 ZDHHC1Q8WTX9 485 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 PCDHB18PQ96TA0 734 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 TAAR2Q9P1P5 351 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 KIAA1468Q9P260 1216 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 UBA2Q9UBT2 640 aaPredicted RBP13.25□□□□□ -0.29
USF1-206ENST00000491629 SEPT3Q9UH03 358 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 PILRAQ9UKJ1 303 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 PLAAQ9Y263 795 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 PLEKHM1Q9Y4G2 1056 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 MED13Q9UHV7 2174 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 CELSR2Q9HCU4 2923 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 LRBAP50851 2863 aa13.25□□□□□ -0.29
USF1-206ENST00000491629 IGHV1OR21-1A0A087WYE8 117 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 TCRBV5S1A1TA0A578 114 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 TRAFD1O14545 582 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms