RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TDRPQ86YL5 185 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM71AQ8IYT1 594 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 LRRC34Q8IZ02 419 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 RIBC1Q8N443 379 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PRELID2Q8N945 189 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TERB1Q8NA31 727 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 XXYLT1Q8NBI6 393 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 GMCL1P1Q8NEA9 526 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ETNPPLQ8TBG4 499 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 FBXO25Q8TCJ0 367 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 NEK9Q8TD19 979 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PIGOQ8TEQ8 1089 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MAML1Q92585 1016 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 INPP5DQ92835 1189 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CD101Q93033 1021 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TEKT1Q969V4 418 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MVB12AQ96EY5 273 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 HMCESQ96FZ2 354 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 NSL1Q96IY1 281 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CFAP57Q96MR6 1250 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TTC25Q96NG3 672 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PRMT1Q99873 361 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MACROD1Q9BQ69 325 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 REEP2Q9BRK0 252 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 IDI2Q9BXS1 227 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 FRMD8P1Q9BZ68 369 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SEMA4CQ9C0C4 833 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CIPCQ9C0C6 399 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF518BQ9C0D4 1074 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MS4A7Q9GZW8 240 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 DPH5Q9H2P9 285 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 VCXQ9H320 206 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CPVLQ9H3G5 476 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 RABEP2Q9H5N1 569 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 DCLRE1BQ9H816 532 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PARVGQ9HBI0 331 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MRPL47Q9HD33 250 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SERHLQ9NQF3 203 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 DUSP22Q9NRW4 184 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ANKEF1Q9NU02 776 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TBC1D22BQ9NU19 505 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PIH1D1Q9NWS0 290 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TRNAU1APQ9NX07 287 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ETAA1Q9NY74 926 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 DLL3Q9NYJ7 618 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 NKIRAS1Q9NYS0 192 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 FLRT1Q9NZU1 646 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 NDUFA13Q9P0J0 144 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MGAT4CQ9UBM8 478 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 HESX1Q9UBX0 185 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF70Q9UC06 446 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 FETUBQ9UGM5 382 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC24A2Q9UI40 661 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CORO1CQ9ULV4 474 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PACSIN2Q9UNF0 486 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 EXOC7Q9UPT5 735 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PCDHB2Q9Y5E7 798 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 USH1CQ9Y6N9 552 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 GAKO14976 1311 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PASKQ96RG2 1323 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ARFGEF1Q9Y6D6 1849 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 RREB1Q92766 1687 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SHANK3Q9BYB0 1731 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 LAMB1P07942 1786 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 LAMB2P55268 1798 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 hCG_2014768A0A024R1R8 64 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 IGLV3-22A0A075B6J6 115 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 SMIM35A0A1B0GVV1 85 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC189A1A4V9 331 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM47DPA6NHR8 397 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 PRSS29PA6NIE9 313 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 TCP11X1B4DZS4 312 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 NT5C1B-RDH14C9J2C7 533 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM86B1E9PN63 330 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 POC1B-GALNT4F8VUJ3 575 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 H0YIZ8 118 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 MPHOSPH10O00566 681 aaKnown RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 PPEF2O14830 753 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 PRPF4O43172 522 aaKnown RBP eCLIP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 SPOPO43791 374 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC22O60826 627 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 ZBED4O75132 1171 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 ENTPD3O75355 529 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM155BO75949 473 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 LUC7L3O95232 432 aaKnown RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 TGDSO95455 350 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 SGPL1O95470 568 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 SHBGP04278 402 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 PRKCBP05771 671 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 ATP5BP06576 529 aaKnown RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 THP07101 528 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM86B2P0C5J1 330 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 KITP10721 976 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 CYP2C9P11712 490 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 UNGP13051 313 aaPredicted RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 CCNB1P14635 433 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 JUPP14923 745 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 AKR1B1P15121 316 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms