RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 H0Y858 1186 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 K7ESF4 209 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 PLK4O00444 970 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 SPINT1O43278 529 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 PLRG1O43660 514 aaKnown RBP18.67■□□□□ 0.58
MCF2L-230ENST00000491028 PRKCGP05129 697 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 PIRTP0C851 137 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 HOXA6P31267 233 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 TPMTP51580 245 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 FAM193AP78312 1265 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 PDIA2Q13087 525 aaKnown RBP18.67■□□□□ 0.58
MCF2L-230ENST00000491028 ARHGEF7Q14155 803 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 TAF1AQ15573 450 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-230ENST00000491028 TMEM52BQ4KMG9 183 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 MSS51Q4VC12 460 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 LRRC73Q5JTD7 316 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 CRTC1Q6UUV9 634 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 NLRP9Q7RTR0 991 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 CCDC25Q86WR0 208 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 CCNJLQ8IV13 435 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 PEX13Q92968 403 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 C19orf43Q9BQ61 176 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 GPR63Q9BZJ6 419 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 RIMKLBQ9ULI2 386 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 SOX13Q9UN79 622 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 TEX264Q9Y6I9 313 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 PLXND1Q9Y4D7 1925 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 SCN8AQ9UQD0 1980 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 CCDC163A0A0D9SF12 145 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 C2orf81A6NN90 581 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 PSMD11O00231 422 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 LAMTOR5O43504 91 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 TSPAN6O43657 245 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 MYBL2P10244 700 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 LHCGRP22888 699 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 OXTRP30559 389 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 TAS2R38P59533 333 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 RALGDSQ12967 914 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 MTM1Q13496 603 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 SEPT6Q14141 434 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 SLMAPQ14BN4 828 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 CDKN3Q16667 212 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 CCDC38Q502W7 563 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 CASC4Q6P4E1 433 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 LYSMD3Q7Z3D4 306 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 RELL1Q8IUW5 271 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 RAVER1Q8IY67 606 aaKnown RBP18.66■□□□□ 0.58
MCF2L-230ENST00000491028 AGGF1Q8N302 714 aaeCLIP18.66■□□□□ 0.58
MCF2L-230ENST00000491028 MPP5Q8N3R9 675 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 TTC30BQ8N4P2 665 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 TMEM105Q8N8V8 129 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 STAMBPL1Q96FJ0 436 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 SMIM14Q96QK8 99 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 EBNA1BP2Q99848 306 aaKnown RBP18.66■□□□□ 0.58
MCF2L-230ENST00000491028 KIFC1Q9BW19 673 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 EPHX3Q9H6B9 360 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 ZFYVE1Q9HBF4 777 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 SGK2Q9HBY8 427 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 PREBQ9HCU5 417 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 SAYSD1Q9NPB0 183 aa18.66■□□□□ 0.58
MCF2L-230ENST00000491028 MROH6A6NGR9 719 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 NEMP1O14524 444 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 LDB2O43679 373 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 ELFN1P0C7U0 828 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 LPOP22079 712 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-230ENST00000491028 HMGCLP35914 325 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 ELK3P41970 407 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 ADPRHP54922 357 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 CRADDP78560 199 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 PTPRRQ15256 657 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 CNGA3Q16281 694 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 LRRC66Q68CR7 880 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 DENND2CQ68D51 928 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 TMC3Q7Z5M5 1100 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 TSPAN33Q86UF1 283 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 GSPT2Q8IYD1 628 aaKnown RBP18.65■□□□□ 0.58
MCF2L-230ENST00000491028 ZBED8Q8IZ13 594 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 CXorf40AQ8TE69 158 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 STYXQ8WUJ0 223 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 BTBD1Q9H0C5 482 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 CHMP2BQ9UQN3 213 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 ITM2BQ9Y287 266 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 MAD1L1Q9Y6D9 718 aa18.65■□□□□ 0.58
MCF2L-230ENST00000491028 ZNF106Q9H2Y7 1883 aaKnown RBP18.65■□□□□ 0.58
MCF2L-230ENST00000491028 FAM237BA0A1B0GVD1 139 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 BANF1O75531 89 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 CLDN7O95471 211 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 TTC4O95801 387 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 PGAM1P18669 254 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 STC1P52823 247 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 MAP9Q49MG5 647 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 TSTD2Q5T7W7 516 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 KIAA1161Q6NSJ0 714 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 NEK5Q6P3R8 708 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 EMBQ6PCB8 327 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 LIPIQ6XZB0 460 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 C1orf210Q8IVY1 113 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 DTWD2Q8NBA8 298 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 FBXO36Q8NEA4 188 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 OR14C36Q8NHC7 312 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms