RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 LIG3P49916 1009 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 DNM1Q05193 864 aaKnown RBP13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 SLC30A9Q6PML9 568 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 LRRC31Q6UY01 552 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 PPM1KQ8N3J5 372 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 NETO2Q8NC67 525 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 GALNT6Q8NCL4 622 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 HMCESQ96FZ2 354 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 RANBP9Q96S59 729 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 ULBP3Q9BZM4 244 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 WDCPQ9H6R7 721 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 CARS2Q9HA77 564 aaKnown RBP13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 ST14Q9Y5Y6 855 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 HSF2BPO75031 334 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 FUCA1P04066 466 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 KELP23276 732 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 STAT1P42224 750 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 CCL11P51671 97 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 ELP6Q0PNE2 266 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 PDCLQ13371 301 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 AGERQ15109 404 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 RESP18Q5W5W9 173 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 C6orf15Q6UXA7 325 aaPredicted RBP13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 AHCYL2Q96HN2 611 aaKnown RBP13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 GSDMCQ9BYG8 508 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 PCDH12Q9NPG4 1184 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 FAM13BQ9NYF5 915 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 MTMR6Q9Y217 621 aa13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 PCDHGA9Q9Y5G4 932 aaKnown RBP13.71□□□□□ -0.21
EXOSC3-207ENST00000490516 TACC2O95359 2948 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 PCSK5Q92824 1860 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 ANKUB1A6NFN9 424 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 RHOBTB3O94955 611 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 GLI1P08151 1106 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 CXCR3P49682 368 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 GPLD1P80108 840 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 ILF3Q12906 894 aaKnown RBP eCLIP13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 EFHC1Q5JVL4 640 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 PAPD7Q5XG87 772 aaKnown RBP13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 SLC6A19Q695T7 634 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 RRAGAQ7L523 313 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 SLC47A2Q86VL8 602 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 PELI3Q8N2H9 469 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 PTCD2Q8WV60 388 aaKnown RBP13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 SNRNP40Q96DI7 357 aaKnown RBP13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 LURAP1Q96LR2 239 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 NT5C1BQ96P26 610 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 CPXM1Q96SM3 734 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 ASF1BQ9NVP2 202 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 ASNSD1Q9NWL6 643 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 PHTF1Q9UMS5 762 aa13.7□□□□□ -0.22
EXOSC3-207ENST00000490516 INSIG1O15503 277 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 TEX33O43247 280 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 LRCH4O75427 683 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 LETM1O95202 739 aaPredicted RBP13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 PIGNO95427 931 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 YEATS4O95619 227 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 NFKBIAP25963 317 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 VARSP26640 1264 aaKnown RBP13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 TSR1Q2NL82 804 aaKnown RBP13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 BRMS1LQ5PSV4 323 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 FAM183BPQ6ZVS7 135 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 LYSMD3Q7Z3D4 306 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 ARHGEF19Q8IW93 802 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 GUF1Q8N442 669 aaKnown RBP13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 C1orf74Q96LT6 269 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 GDAP1L1Q96MZ0 367 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 ZYG11BQ9C0D3 744 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 TTYH3Q9C0H2 523 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 ACP6Q9NPH0 428 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 NDFIP2Q9NV92 336 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 KLHL3Q9UH77 587 aa13.69□□□□□ -0.22
EXOSC3-207ENST00000490516 DCHS2Q6V1P9 2916 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 TRBV23OR9-2A0A075B6M9 112 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 ARGFXA6NJG6 315 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 CETN3O15182 167 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 DPM1O60762 260 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 DAB1O75553 588 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 RECQL5O94762 991 aaPredicted RBP13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 HOXC4P09017 264 aaPredicted RBP13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 CASP14P31944 242 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 TRIM23P36406 574 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 MMP12P39900 470 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 GNPDA1P46926 289 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 CTBSQ01459 385 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 RAD51Q06609 339 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 FOXM1Q08050 763 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 DNASE1L3Q13609 305 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 RAPGEF1Q13905 1077 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 CHRNA6Q15825 494 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 UGP2Q16851 508 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 RBMXL3Q8N7X1 1067 aaKnown RBP13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 OR10G6Q8NH81 332 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 ZNF606Q8WXB4 792 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 NCSTNQ92542 709 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 SLC35C1Q96A29 364 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 STAMBPL1Q96FJ0 436 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 WDR26Q9H7D7 661 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 METTL14Q9HCE5 456 aaKnown RBP13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 ACSS2Q9NR19 701 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms