RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 GTPBP1O00178 669 aaKnown RBP4.02□□□□□ -1.77
CD46-216ENST00000490278 WNT9BO14905 357 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 TIMM23O14925 209 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 DOK2O60496 412 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 HNRNPCL1O60812 293 aaKnown RBP4.02□□□□□ -1.77
CD46-216ENST00000490278 ZNF182P17025 639 aaPredicted RBP4.02□□□□□ -1.77
CD46-216ENST00000490278 PPARGP37231 505 aaPredicted RBP4.02□□□□□ -1.77
CD46-216ENST00000490278 PIGAP37287 484 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 RPL3P39023 403 aaKnown RBP4.02□□□□□ -1.77
CD46-216ENST00000490278 CLNS1AP54105 237 aaKnown RBP4.02□□□□□ -1.77
CD46-216ENST00000490278 DRG2P55039 364 aaKnown RBP4.02□□□□□ -1.77
CD46-216ENST00000490278 F2RL1P55085 397 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 ABATP80404 500 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 NIPAL4Q0D2K0 466 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 Q0VFX4 171 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 AWAT2Q6E213 333 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 ZNF549Q6P9A3 640 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 PCGF5Q86SE9 256 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 WDR63Q8IWG1 891 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 PRR26Q8N8Z3 221 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 SCFD2Q8WU76 684 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 NSMCE1Q8WV22 266 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 OIT3Q8WWZ8 545 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 TMEM68Q96MH6 324 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 TMEM47Q9BQJ4 181 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 MKKSQ9NPJ1 570 aaPredicted RBP4.02□□□□□ -1.77
CD46-216ENST00000490278 SEPT11Q9NVA2 429 aaKnown RBP4.02□□□□□ -1.77
CD46-216ENST00000490278 ERVK-11Q9UQG0 969 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 SLC45A1Q9Y2W3 748 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 CEPT1Q9Y6K0 416 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 STON1Q9Y6Q2 735 aa4.02□□□□□ -1.77
CD46-216ENST00000490278 J3KR12 359 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 NKX2-2O95096 273 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 MLYCDO95822 493 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 HOXC6P09630 235 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 RARGP13631 454 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 IL7RP16871 459 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 ARRB2P32121 409 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 AMTP48728 403 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 PRAMEP78395 509 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 KRT24Q2M2I5 525 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 C2orf68Q2NKX9 166 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 MMEL1Q495T6 779 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 CXorf66Q5JRM2 361 aaPredicted RBP4.01□□□□□ -1.77
CD46-216ENST00000490278 FAM205BPQ63HN1 556 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 TYW3Q6IPR3 259 aaKnown RBP4.01□□□□□ -1.77
CD46-216ENST00000490278 PLEKHA7Q6IQ23 1121 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 ANKRD54Q6NXT1 300 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 KLHL35Q6PF15 583 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 SARM1Q6SZW1 724 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 MTSS1LQ765P7 747 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 HAPLN4Q86UW8 402 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 PELI3Q8N2H9 469 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 OR14A16Q8NHC5 309 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 TXNDC15Q96J42 360 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 LRFN5Q96NI6 719 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 SDF4Q9BRK5 362 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 MMTAG2Q9BU76 263 aaKnown RBP4.01□□□□□ -1.77
CD46-216ENST00000490278 C1QTNF5Q9BXJ0 243 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 IFIH1Q9BYX4 1025 aaKnown RBP4.01□□□□□ -1.77
CD46-216ENST00000490278 SH2D4AQ9H788 454 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 KAT14Q9H8E8 782 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 MRPL44Q9H9J2 332 aaKnown RBP4.01□□□□□ -1.77
CD46-216ENST00000490278 GPR108Q9NPR9 543 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 RRP7BPQ9NSQ0 103 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 CNOT8Q9UFF9 292 aaKnown RBP4.01□□□□□ -1.77
CD46-216ENST00000490278 FBXO2Q9UK22 296 aaPredicted RBP4.01□□□□□ -1.77
CD46-216ENST00000490278 RCOR1Q9UKL0 485 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 MYO6Q9UM54 1294 aa4.01□□□□□ -1.77
CD46-216ENST00000490278 TTC3P53804 2025 aa4□□□□□ -1.77
CD46-216ENST00000490278 DYTNA2CJ06 578 aa4□□□□□ -1.77
CD46-216ENST00000490278 MYO1GB0I1T2 1018 aa4□□□□□ -1.77
CD46-216ENST00000490278 AKR1B15C9JRZ8 316 aaPredicted RBP4□□□□□ -1.77
CD46-216ENST00000490278 AP3D1O14617 1153 aa4□□□□□ -1.77
CD46-216ENST00000490278 HSPA12AO43301 675 aa4□□□□□ -1.77
CD46-216ENST00000490278 NDUFS3O75489 264 aa4□□□□□ -1.77
CD46-216ENST00000490278 SLC25A12O75746 678 aa4□□□□□ -1.77
CD46-216ENST00000490278 DDX5P17844 614 aaKnown RBP4□□□□□ -1.77
CD46-216ENST00000490278 C21orf33P30042 268 aaPredicted RBP4□□□□□ -1.77
CD46-216ENST00000490278 TM4SF1P30408 202 aa4□□□□□ -1.77
CD46-216ENST00000490278 COMPP49747 757 aaPredicted RBP4□□□□□ -1.77
CD46-216ENST00000490278 RGS19P49795 217 aa4□□□□□ -1.77
CD46-216ENST00000490278 MXI1P50539 228 aa4□□□□□ -1.77
CD46-216ENST00000490278 POLGP54098 1239 aaPredicted RBP4□□□□□ -1.77
CD46-216ENST00000490278 DSC1Q08554 894 aa4□□□□□ -1.77
CD46-216ENST00000490278 HNRNPA0Q13151 305 aaKnown RBP4□□□□□ -1.77
CD46-216ENST00000490278 CRYMQ14894 314 aa4□□□□□ -1.77
CD46-216ENST00000490278 TDRD12Q587J7 1177 aaKnown RBP4□□□□□ -1.77
CD46-216ENST00000490278 PPP6R3Q5H9R7 873 aaPredicted RBP4□□□□□ -1.77
CD46-216ENST00000490278 SPATA1Q5VX52 437 aa4□□□□□ -1.77
CD46-216ENST00000490278 HIST2H2BCQ6DN03 193 aa4□□□□□ -1.77
CD46-216ENST00000490278 HIST2H2BDQ6DRA6 164 aa4□□□□□ -1.77
CD46-216ENST00000490278 METTL2BQ6P1Q9 378 aaKnown RBP4□□□□□ -1.77
CD46-216ENST00000490278 C8orf82Q6P1X6 216 aaPredicted RBP4□□□□□ -1.77
CD46-216ENST00000490278 TMEM154Q6P9G4 183 aa4□□□□□ -1.77
CD46-216ENST00000490278 TMED8Q6PL24 325 aaPredicted RBP4□□□□□ -1.77
CD46-216ENST00000490278 DLK2Q6UY11 383 aa4□□□□□ -1.77
CD46-216ENST00000490278 C9orf47Q6ZRZ4 202 aa4□□□□□ -1.77
CD46-216ENST00000490278 FASTKD5Q7L8L6 764 aaKnown RBP4□□□□□ -1.77
CD46-216ENST00000490278 CCDC13Q8IYE1 715 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms