RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 TAF4O00268 1085 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 KRT10P13645 584 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 KCNA5P22460 613 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 CRIP2P52943 208 aaPredicted RBP3.76□□□□□ -1.81
HMGN1-218ENST00000490032 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 SEC61BP60468 96 aaKnown RBP3.76□□□□□ -1.81
HMGN1-218ENST00000490032 PHEXP78562 749 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 SLC20A2Q08357 652 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 GRIK3Q13003 919 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 MMEL1Q495T6 779 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 ATG16L1Q676U5 607 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 FBXL22Q6P050 247 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 KRBA2Q6ZNG9 492 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 LINGO2Q7L985 606 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 TRMT1LQ7Z2T5 733 aaKnown RBP3.76□□□□□ -1.81
HMGN1-218ENST00000490032 GPAT4Q86UL3 456 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 CIARTQ8N365 385 aaPredicted RBP3.76□□□□□ -1.81
HMGN1-218ENST00000490032 IL17RCQ8NAC3 791 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 BEST2Q8NFU1 509 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 TMEM255BQ8WV15 326 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 HERVK_113Q902F9 699 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 WBP2Q969T9 261 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 WBP1Q96G27 269 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 SIN3AQ96ST3 1273 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 KXD1Q9BQD3 176 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 ZFP57Q9NU63 452 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 KCNS2Q9ULS6 477 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 PSAT1Q9Y617 370 aa3.76□□□□□ -1.81
HMGN1-218ENST00000490032 GAGE10A6NGK3 116 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 AKR1B15C9JRZ8 316 aaPredicted RBP3.75□□□□□ -1.81
HMGN1-218ENST00000490032 C16orf97H3BN30 126 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 FGF17O60258 216 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 MT-CYBP00156 380 aaPredicted RBP3.75□□□□□ -1.81
HMGN1-218ENST00000490032 URODP06132 367 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 CFC1BP0CG36 223 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 CFC1P0CG37 223 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 HLA-DOBP13765 273 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 MARK3P27448 753 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 CCR5P51681 352 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 EFNA5P52803 228 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 EFNB1P98172 346 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 RELQ04864 619 aaPredicted RBP3.75□□□□□ -1.81
HMGN1-218ENST00000490032 UBE3AQ05086 875 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 BIRC2Q13490 618 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 KRT24Q2M2I5 525 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 ZNF766Q5HY98 468 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 CEP85LQ5SZL2 805 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 C19orf48Q6RUI8 117 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 GFRALQ6UXV0 394 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 LDHAL6AQ6ZMR3 332 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 RND1Q92730 232 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 ZNF570Q96NI8 536 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 ARPC5LQ9BPX5 153 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 NUF2Q9BZD4 464 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 KCNN2Q9H2S1 579 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 PLEKHA5Q9HAU0 1116 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 MAGEE1Q9HCI5 957 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 FBRSL1Q9HCM7 1045 aaKnown RBP3.75□□□□□ -1.81
HMGN1-218ENST00000490032 ZNF334Q9HCZ1 680 aaPredicted RBP3.75□□□□□ -1.81
HMGN1-218ENST00000490032 TMEM30AQ9NV96 361 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 BEX4Q9NWD9 120 aaPredicted RBP3.75□□□□□ -1.81
HMGN1-218ENST00000490032 HCN3Q9P1Z3 774 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 GAB2Q9UQC2 676 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 GPR52Q9Y2T5 361 aa3.75□□□□□ -1.81
HMGN1-218ENST00000490032 PDS5AQ29RF7 1337 aaKnown RBP3.74□□□□□ -1.81
HMGN1-218ENST00000490032 ASPDHA6ND91 283 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 GOLGA6L9A6NEM1 432 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 GUCY1B2O75343 617 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 HMGB1P09429 215 aaKnown RBP3.74□□□□□ -1.81
HMGN1-218ENST00000490032 CETPP11597 493 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 CDH1P12830 882 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 DDX5P17844 614 aaKnown RBP3.74□□□□□ -1.81
HMGN1-218ENST00000490032 CD53P19397 219 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 MAOAP21397 527 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 POU1F1P28069 291 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 TIMP3P35625 211 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 PSMC2P35998 433 aaKnown RBP3.74□□□□□ -1.81
HMGN1-218ENST00000490032 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGN1-218ENST00000490032 VEPH1Q14D04 833 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 CTF1Q16619 201 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 TCTN1Q2MV58 587 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 KCNT1Q5JUK3 1230 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 TXNDC8Q6A555 127 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 PLEKHA7Q6IQ23 1121 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 TMEM81Q6P7N7 255 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 LRRC8DQ7L1W4 858 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 TAOK1Q7L7X3 1001 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 DSG4Q86SJ6 1040 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 TMEM219Q86XT9 240 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 CPOQ8IVL8 374 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 WDR63Q8IWG1 891 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 SLC35F3Q8IY50 421 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 LRRC8CQ8TDW0 803 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 TRMT61BQ9BVS5 477 aaKnown RBP3.74□□□□□ -1.81
HMGN1-218ENST00000490032 CTNNAL1Q9UBT7 734 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 HSPB7Q9UBY9 170 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 RCOR1Q9UKL0 485 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 HSF4Q9ULV5 492 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 TCF19Q9Y242 345 aa3.74□□□□□ -1.81
HMGN1-218ENST00000490032 TMEM202A6NGA9 273 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms