RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 ACSL4O60488 711 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 CER1O95813 267 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 KNG1P01042 644 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 IGHV4-34P06331 123 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 ATXN1LP0C7T5 689 aaKnown RBP6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 SETSIPP0DME0 302 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 ACADMP11310 421 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 TBXAS1P24557 533 aaPredicted RBP6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 CD27P26842 260 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 SLC6A4P31645 630 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 CD70P32970 193 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 ADIGQ0VDE8 80 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 PNOCQ13519 176 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 EIF4EBP2Q13542 120 aaPredicted RBP6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 KIF19Q2TAC6 998 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 ZNF658Q5TYW1 1059 aaPredicted RBP6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 NADSYN1Q6IA69 706 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 RFWD3Q6PCD5 774 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 CHST9Q7L1S5 443 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 BEND5Q7L4P6 421 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 UNC45BQ8IWX7 931 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 AHI1Q8N157 1196 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 KDM1BQ8NB78 822 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 RNF139Q8WU17 664 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 BIRC7Q96CA5 298 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 MBD6Q96DN6 1003 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 SLC39A13Q96H72 371 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 MRFAP1L1Q96HT8 127 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 BTBD1Q9H0C5 482 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 RSPH9Q9H1X1 276 aaPredicted RBP6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 LHX5Q9H2C1 402 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 SMURF1Q9HCE7 757 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 TM9SF3Q9HD45 589 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 HESX1Q9UBX0 185 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 SUN2Q9UH99 717 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 GGA2Q9UJY4 613 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 CNTN6Q9UQ52 1028 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 APOBEC2Q9Y235 224 aaKnown RBP6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 BTBD3Q9Y2F9 522 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 ANKRD6Q9Y2G4 727 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 COQ6Q9Y2Z9 468 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 KALRNO60229 2985 aa6.58□□□□□ -1.36
PRPF40A-210ENST00000489741 URB1O60287 2271 aaKnown RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 BPTFQ12830 3046 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 TBL1XO60907 577 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 SEMA4FO95754 770 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 ATP5BP06576 529 aaKnown RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 CD19P15391 556 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 GPD2P43304 727 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 FMO5P49326 533 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 RGS7P49802 495 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 YWHAEP62258 255 aaKnown RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 LRRC63Q05C16 580 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 SMAD1Q15797 465 aaKnown RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 HNRNPA1L2Q32P51 320 aaKnown RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 FNDC3BQ53EP0 1204 aaKnown RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 C9orf64Q5T6V5 341 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 NUGGCQ68CJ6 796 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 FOXR2Q6PJQ5 311 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 USP30Q70CQ3 517 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 ELOA2Q8IYF1 753 aaPredicted RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 SIX6OS1Q8N1H7 587 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 LILRB2Q8N423 598 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 ZNF366Q8N895 744 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 SETD7Q8WTS6 366 aaKnown RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 CLEC4CQ8WTT0 213 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 GOLGA1Q92805 767 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 KAT5Q92993 513 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 IGSF8Q969P0 613 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 PRICKLE1Q96MT3 831 aaPredicted RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 GTPBP4Q9BZE4 634 aaKnown RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 MTG2Q9H4K7 406 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 EBF2Q9HAK2 575 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 SGK2Q9HBY8 427 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 METTL14Q9HCE5 456 aaKnown RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 KCND1Q9NSA2 647 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 RMND1Q9NWS8 449 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 ARMCX3Q9UH62 379 aaPredicted RBP6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 SCML1Q9UN30 329 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 ATP6V1DQ9Y5K8 247 aa6.57□□□□□ -1.36
PRPF40A-210ENST00000489741 NUMA1Q14980 2115 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 HELZ2Q9BYK8 2649 aaKnown RBP6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 A0A1W2PPC4 97 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 A0A1W2PR77 199 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 TARSL2A2RTX5 802 aaKnown RBP6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 TRIM49BA6NDI0 452 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 VILLO15195 856 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 P4HA2O15460 535 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 TNFSF14O43557 240 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 DFNA5O60443 496 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 KLHL18O94889 574 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 CALCAP01258 141 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 IGLV3-25P01717 112 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 DNTTP04053 509 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 WNT1P04628 370 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 POLR2EP19388 210 aaKnown RBP6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 CSKP41240 450 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 SLC11A2P49281 568 aa6.56□□□□□ -1.36
PRPF40A-210ENST00000489741 GALCP54803 685 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms