RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 FBXO4Q9UKT5 387 aa10.93□□□□□ -0.66
TFF3-203ENST00000489676 V9GYY5 206 aaPredicted RBP10.93□□□□□ -0.66
TFF3-203ENST00000489676 FRYLO94915 3013 aa10.93□□□□□ -0.66
TFF3-203ENST00000489676 MROH6A6NGR9 719 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 H0Y858 1186 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 AP3B1O00203 1094 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 LDB2O43679 373 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 MYBL2P10244 700 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 CYP2A6P11509 494 aaPredicted RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 TPH1P17752 444 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 XPAP23025 273 aaPredicted RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 PSMA3P25788 255 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 TNNT3P45378 269 aaPredicted RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 ZNF140P52738 457 aaPredicted RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 STC1P52823 247 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 SESN2P58004 480 aaPredicted RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 CRADDP78560 199 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 SARNPP82979 210 aaKnown RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 ELP6Q0PNE2 266 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 SFSWAPQ12872 951 aaKnown RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 HIF1AQ16665 826 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 ERCC6LQ2NKX8 1250 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 TMEM259Q4ZIN3 620 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 ARMC3Q5W041 872 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 LRRC66Q68CR7 880 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 ERAP2Q6P179 960 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 LIPIQ6XZB0 460 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 LYSMD3Q7Z3D4 306 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 IFT20Q8IY31 132 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 PGBD3Q8N328 593 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 PAF1Q8N7H5 531 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 FRMD1Q8N878 549 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 EIF1ADQ8N9N8 165 aaKnown RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 DNAAF3Q8N9W5 541 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 BRSK1Q8TDC3 778 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 BLOC1S5Q8TDH9 187 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 UBXN4Q92575 508 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 SIGLEC10Q96LC7 697 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 SRPK1Q96SB4 655 aaKnown RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 OMDQ99983 421 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 IL22Q9GZX6 179 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 KDM4CQ9H3R0 1056 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 TRABDQ9H4I3 376 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 PLAC1Q9HBJ0 212 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 SGK2Q9HBY8 427 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 PREBQ9HCU5 417 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 SYBUQ9NX95 663 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 WSB2Q9NYS7 404 aaPredicted RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 HACD3Q9P035 362 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 NFKBIL1Q9UBC1 381 aaPredicted RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 CYP8B1Q9UNU6 501 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 ZFR2Q9UPR6 939 aaKnown RBP10.92□□□□□ -0.66
TFF3-203ENST00000489676 NCKAP1Q9Y2A7 1128 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 FANCMQ8IYD8 2048 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 USP34Q70CQ2 3546 aa10.92□□□□□ -0.66
TFF3-203ENST00000489676 TRPM6Q9BX84 2022 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 C1orf232A0A0U1RR37 186 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 PSMD11O00231 422 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 LATO43561 262 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 TSPAN6O43657 245 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 BANF1O75531 89 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 CLDN7O95471 211 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 C1SP09871 688 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 ZNF30P17039 623 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 MGAT1P26572 445 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 CD6P30203 668 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 OXTRP30559 389 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 HMGCLP35914 325 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 NPY2RP49146 381 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 FNTBP49356 437 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 ARL4CP56559 192 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 PPP2CBP62714 309 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 VSNL1P62760 191 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 PPP2CAP67775 309 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 FAM193AP78312 1265 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 CREB5Q02930 508 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 PTSQ03393 145 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 ACVR1Q04771 509 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 CCDC15Q0P6D6 951 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 NAA30Q147X3 362 aaPredicted RBP10.91□□□□□ -0.66
TFF3-203ENST00000489676 POU6F1Q14863 301 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 FASTKD3Q14CZ7 662 aaKnown RBP10.91□□□□□ -0.66
TFF3-203ENST00000489676 AGERQ15109 404 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 TAF1AQ15573 450 aaPredicted RBP10.91□□□□□ -0.66
TFF3-203ENST00000489676 WDR93Q6P2C0 686 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 GLT6D1Q7Z4J2 308 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 TMC3Q7Z5M5 1100 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 FAM124AQ86V42 546 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 TRIM69Q86WT6 500 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 NDUFAF2Q8N183 169 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 FAM160A2Q8N612 972 aaPredicted RBP10.91□□□□□ -0.66
TFF3-203ENST00000489676 OR2T34Q8NGX1 318 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 OR14C36Q8NHC7 312 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 GANCQ8TET4 914 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
TFF3-203ENST00000489676 RLN3Q8WXF3 142 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 TOE1Q96GM8 510 aaKnown RBP10.91□□□□□ -0.66
TFF3-203ENST00000489676 COQ10AQ96MF6 247 aa10.91□□□□□ -0.66
TFF3-203ENST00000489676 ZNF778Q96MU6 729 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms