RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 EDIL3O43854 480 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 MMP2P08253 660 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 ETFAP13804 333 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 GRK6P43250 576 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 LINC01547P58512 204 aaPredicted RBP3.03□□□□□ -1.92
CPSF3-205ENST00000489629 FCN2Q15485 313 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 PDCD2Q16342 344 aaPredicted RBP3.03□□□□□ -1.92
CPSF3-205ENST00000489629 MMEL1Q495T6 779 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 SGO1Q5FBB7 561 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 ZNF667Q5HYK9 610 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 SERTAD4-AS1Q5TG53 156 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 FAM72AQ5TYM5 149 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 PLEKHA7Q6IQ23 1121 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 FAM72DQ6L9T8 149 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 SLC26A9Q7LBE3 791 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 SLC9B2Q86UD5 537 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 NFE4Q86UQ8 179 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 FAM72BQ86X60 149 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 EPHX4Q8IUS5 362 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 ODF3L1Q8IXM7 274 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 SCCPDHQ8NBX0 429 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 KCNH5Q8NCM2 988 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 MAGEC3Q8TD91 643 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 SLC20A1Q8WUM9 679 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 ZNF501Q96CX3 271 aaPredicted RBP3.03□□□□□ -1.92
CPSF3-205ENST00000489629 REEP2Q9BRK0 252 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 GFRA4Q9GZZ7 299 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 ZNF696Q9H7X3 374 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 PLEKHA5Q9HAU0 1116 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 MKKSQ9NPJ1 570 aaPredicted RBP3.03□□□□□ -1.92
CPSF3-205ENST00000489629 CNGB3Q9NQW8 809 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 ALKBH4Q9NXW9 302 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 KIAA1456Q9P272 454 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 RALYQ9UKM9 306 aaKnown RBP3.03□□□□□ -1.92
CPSF3-205ENST00000489629 CARD8Q9Y2G2 431 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 CCDC194A0A1B0GVG4 234 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 LILRA5A6NI73 299 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 HEXAP06865 529 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 S1PR1P21453 382 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 ATP12AP54707 1039 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 ARL4CP56559 192 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 SEC61BP60468 96 aaKnown RBP3.02□□□□□ -1.93
CPSF3-205ENST00000489629 PITX1P78337 314 aaPredicted RBP3.02□□□□□ -1.93
CPSF3-205ENST00000489629 GRIK3Q13003 919 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 ITGADQ13349 1161 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 KCNT1Q5JUK3 1230 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 WDR45BQ5MNZ6 344 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 ANKRD45Q5TZF3 282 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 ANO1Q5XXA6 986 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 KRBA2Q6ZNG9 492 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 C2CD5Q86YS7 1000 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 KRTAP7-1Q8IUC3 87 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 TMTC1Q8IUR5 882 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 WDR63Q8IWG1 891 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.02□□□□□ -1.93
CPSF3-205ENST00000489629 C1orf87Q8N0U7 546 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 ENAHQ8N8S7 591 aaPredicted RBP3.02□□□□□ -1.93
CPSF3-205ENST00000489629 RUFY2Q8WXA3 655 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 PPM1EQ8WY54 764 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 STAMQ92783 540 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 ABTB1Q969K4 478 aaPredicted RBP3.02□□□□□ -1.93
CPSF3-205ENST00000489629 TBC1D20Q96BZ9 403 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 FBXL8Q96CD0 374 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 ZNF570Q96NI8 536 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 EYA3Q99504 573 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 MPHOSPH6Q99547 160 aaKnown RBP3.02□□□□□ -1.93
CPSF3-205ENST00000489629 KXD1Q9BQD3 176 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 ITM2CQ9NQX7 267 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 SNTG1Q9NSN8 517 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 ABCF3Q9NUQ8 709 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 BABAM1Q9NWV8 329 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 PEMTQ9UBM1 199 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 CTNNAL1Q9UBT7 734 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 POU2F3Q9UKI9 436 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 STON1Q9Y6Q2 735 aa3.02□□□□□ -1.93
CPSF3-205ENST00000489629 GOLGA6L10A0A0M3HER8 536 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 TSPAN3O60637 253 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 CYC1P08574 325 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 EIF2S3P41091 472 aaKnown RBP3.01□□□□□ -1.93
CPSF3-205ENST00000489629 PAPOLAP51003 745 aaKnown RBP3.01□□□□□ -1.93
CPSF3-205ENST00000489629 EFNA5P52803 228 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 RAD23BP54727 409 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 TAF11Q15544 211 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 KRT24Q2M2I5 525 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 C14orf177Q52M58 125 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 FBXO47Q5MNV8 452 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 BBS12Q6ZW61 710 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 TAOK1Q7L7X3 1001 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 LINGO2Q7L985 606 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 ADGRG6Q86SQ4 1221 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 TADA2BQ86TJ2 420 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 GPAT4Q86UL3 456 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 KMT5CQ86Y97 462 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 ZNF34Q8IZ26 560 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 PLD5Q8N7P1 536 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 DMBX1Q8NFW5 382 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 BBS10Q8TAM1 723 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 ELP4Q96EB1 424 aa3.01□□□□□ -1.93
CPSF3-205ENST00000489629 ALG14Q96F25 216 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms