RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 LPOP22079 712 aaPredicted RBP20.94■□□□□ 0.94
SND1-214ENST00000489417 ARNTP27540 789 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 ATP5DP30049 168 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 HNF1BP35680 557 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 KIR2DL1P43626 348 aaPredicted RBP20.94■□□□□ 0.94
SND1-214ENST00000489417 SEC13P55735 322 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 POLR2LP62875 67 aaKnown RBP20.94■□□□□ 0.94
SND1-214ENST00000489417 PDE1BQ01064 536 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 ELAVL3Q14576 367 aaKnown RBP20.94■□□□□ 0.94
SND1-214ENST00000489417 ZNF805Q5CZA5 627 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 TMEM196Q5HYL7 178 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 KCTD16Q68DU8 428 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 FSTL4Q6MZW2 842 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 USP45Q70EL2 814 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 CYP4X1Q8N118 509 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 KRT222Q8N1A0 295 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 OR13C4Q8NGS5 318 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 MAFAQ8NHW3 353 aaPredicted RBP20.94■□□□□ 0.94
SND1-214ENST00000489417 HCAR2Q8TDS4 363 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 GPR63Q9BZJ6 419 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 IARS2Q9NSE4 1012 aaKnown RBP20.94■□□□□ 0.94
SND1-214ENST00000489417 NLE1Q9NVX2 485 aaPredicted RBP20.94■□□□□ 0.94
SND1-214ENST00000489417 OGFRQ9NZT2 677 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 SLC17A6Q9P2U8 582 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 DKK3Q9UBP4 350 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 NOVA2Q9UNW9 492 aaKnown RBP20.94■□□□□ 0.94
SND1-214ENST00000489417 SLC7A4O43246 635 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 UGT1A9O60656 530 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 RPP40O75818 363 aaKnown RBP20.93■□□□□ 0.94
SND1-214ENST00000489417 EGFP01133 1207 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 DRD1P21728 446 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 PSMA3P25788 255 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 ARSDP51689 593 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 TMPRSS15P98073 1019 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 THOC5Q13769 683 aaKnown RBP20.93■□□□□ 0.94
SND1-214ENST00000489417 PTPRCAPQ14761 206 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 TNFAIP8L3Q5GJ75 292 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 IER5LQ5T953 404 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 TEDDM1Q5T9Z0 273 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 LYSMD3Q7Z3D4 306 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 CHPFQ8IZ52 775 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 TMIEQ8NEW7 156 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 OR4K2Q8NGD2 314 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 HDAC10Q969S8 669 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 TLCD1Q96CP7 247 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 MCCC1Q96RQ3 725 aaPredicted RBP20.93■□□□□ 0.94
SND1-214ENST00000489417 LYSMD1Q96S90 227 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 FAM167BQ9BTA0 163 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 UGT1A7Q9HAW7 530 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 UGT1A10Q9HAW8 530 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 UGT1A8Q9HAW9 530 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 PRSS16Q9NQE7 514 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 PRDM6Q9NQX0 595 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 POLR3BQ9NW08 1133 aaPredicted RBP20.93■□□□□ 0.94
SND1-214ENST00000489417 GGT7Q9UJ14 662 aa20.93■□□□□ 0.94
SND1-214ENST00000489417 GOLGA8TH3BQL2 631 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 FAM155BO75949 473 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 CHRM1P11229 460 aaPredicted RBP20.92■□□□□ 0.94
SND1-214ENST00000489417 TIE1P35590 1138 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 WASP42768 502 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 SERPINB9P50453 376 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 PRAMEP78395 509 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 GRSF1Q12849 480 aaKnown RBP eCLIP20.92■□□□□ 0.94
SND1-214ENST00000489417 PACS1Q6VY07 963 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 DSG4Q86SJ6 1040 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 KCNV2Q8TDN2 545 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 SCRN2Q96FV2 425 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 FAM129BQ96TA1 746 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 AGAP2Q99490 1192 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 MFSD1Q9H3U5 465 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 NSMCE4AQ9NXX6 385 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 PPM1HQ9ULR3 514 aa20.92■□□□□ 0.94
SND1-214ENST00000489417 C1orf232A0A0U1RR37 186 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 IQANK1A0A1B0GTG1 560 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 NPIPB15A6NHN6 443 aaPredicted RBP20.91■□□□□ 0.94
SND1-214ENST00000489417 UPK3BL1B0FP48 263 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 UPK3BL2E5RIL1 263 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 KPNA3O00505 521 aaPredicted RBP20.91■□□□□ 0.94
SND1-214ENST00000489417 CCL22O00626 93 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 STX7O15400 261 aaKnown RBP20.91■□□□□ 0.94
SND1-214ENST00000489417 CDKN3Q16667 212 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 UGP2Q16851 508 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 NEPROQ6NW34 567 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 TPRG1Q6ZUI0 275 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 CNTN4Q8IWV2 1026 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 OR6P1Q8NGX9 317 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 GABPB2Q8TAK5 448 aaPredicted RBP20.91■□□□□ 0.94
SND1-214ENST00000489417 PIP4K2CQ8TBX8 421 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 TBATAQ96M53 351 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 CPNE1Q99829 537 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 TXNDC16Q9P2K2 825 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 SARDHQ9UL12 918 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 PSAT1Q9Y617 370 aa20.91■□□□□ 0.94
SND1-214ENST00000489417 A0A0U1RQS6 177 aa20.9■□□□□ 0.94
SND1-214ENST00000489417 CCDC162PA2VCL2 907 aa20.9■□□□□ 0.94
SND1-214ENST00000489417 TIMP2P16035 220 aa20.9■□□□□ 0.94
SND1-214ENST00000489417 NFKBIAP25963 317 aa20.9■□□□□ 0.94
SND1-214ENST00000489417 HMGCLP35914 325 aa20.9■□□□□ 0.94
SND1-214ENST00000489417 GP5P40197 560 aa20.9■□□□□ 0.94
SND1-214ENST00000489417 MAGOHP61326 146 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms