RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 PTPN7P35236 360 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 GARSP41250 739 aaKnown RBP16.24■□□□□ 0.19
MCF2L-229ENST00000488765 ALDH7A1P49419 539 aaKnown RBP16.24■□□□□ 0.19
MCF2L-229ENST00000488765 MTMR1Q13613 665 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 BAATQ14032 418 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-229ENST00000488765 RABL3Q5HYI8 236 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 OR6B2Q6IFH4 312 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 RETREG3Q86VR2 466 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 C9orf16Q9BUW7 83 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 CCDC177Q9NQR7 707 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-229ENST00000488765 UBP1Q9NZI7 540 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 INVSQ9Y283 1065 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 SYNJ2BP-COX16A0A087WUM0 186 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 TCF3P15923 654 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 GPLD1P80108 840 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 GRSF1Q12849 480 aaKnown RBP eCLIP16.23■□□□□ 0.19
MCF2L-229ENST00000488765 STX5Q13190 355 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 HABP4Q5JVS0 413 aaKnown RBP16.23■□□□□ 0.19
MCF2L-229ENST00000488765 CCBE1Q6UXH8 406 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-229ENST00000488765 CNTD1Q8N815 330 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 TERB1Q8NA31 727 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 CCDC120Q96HB5 630 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 MRIQ9BWK5 157 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 COX16Q9P0S2 106 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 TMEM9Q9P0T7 183 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 ENPP5Q9UJA9 477 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 MRPL42Q9Y6G3 142 aaKnown RBP16.23■□□□□ 0.19
MCF2L-229ENST00000488765 ITIH1P19827 911 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 IL4RP24394 825 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 SLC12A2P55011 1212 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 LAPTM5Q13571 262 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 GRM3Q14832 879 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 CTF1Q16619 201 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 CNSTQ6PJW8 725 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 DCP2Q8IU60 420 aaKnown RBP16.23■□□□□ 0.19
MCF2L-229ENST00000488765 DNAAF3Q8N9W5 541 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 MCUQ8NE86 351 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 OR52K1Q8NGK4 314 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 FKBP10Q96AY3 582 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 FBXL18Q96ME1 805 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 VPS35Q96QK1 796 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 GAD1Q99259 594 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 RHNO1Q9BSD3 238 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 AGPAT4Q9NRZ5 378 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 PCDH10Q9P2E7 1040 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 PDZK1P1A8MUH7 402 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 SDHDO14521 159 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 HUS1O60921 280 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 PSMB9P28065 219 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 CD68P34810 354 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-229ENST00000488765 NUMBP49757 651 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 NIPAL4Q0D2K0 466 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 HERC3Q15034 1050 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 SAMD4BQ5PRF9 694 aaKnown RBP16.23■□□□□ 0.19
MCF2L-229ENST00000488765 TRNP1Q6NT89 227 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 LINC00523Q86TU6 105 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 TTC39CQ8N584 583 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 SLC22A17Q8WUG5 538 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 CENPNQ96H22 339 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-229ENST00000488765 GMLQ99445 158 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 ADAMTS10Q9H324 1103 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 GPN2Q9H9Y4 310 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-229ENST00000488765 IARS2Q9NSE4 1012 aaKnown RBP16.23■□□□□ 0.19
MCF2L-229ENST00000488765 CCM2LQ9NUG4 571 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-229ENST00000488765 C14orf119Q9NWQ9 140 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 MAT2BQ9NZL9 334 aa16.23■□□□□ 0.19
MCF2L-229ENST00000488765 ERVH48-1M5A8F1 160 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 PMM2O15305 246 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 TOMM70O94826 608 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 DNTTP04053 509 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 GSNP06396 782 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 SNRPB2P08579 225 aaKnown RBP16.22■□□□□ 0.19
MCF2L-229ENST00000488765 HTR1AP08908 422 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 GLULP15104 373 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 PRKACGP22612 351 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 WEE1P30291 646 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 GP5P40197 560 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 PPP2R2BQ00005 443 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 NXNL2Q5VZ03 156 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 TAS1R3Q7RTX0 852 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 TP53INP2Q8IXH6 220 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 GALNT12Q8IXK2 581 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 MFSD2AQ8NA29 543 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 APPL2Q8NEU8 664 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 ARNTL2Q8WYA1 636 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 TMEM74Q96NL1 305 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 XPR1Q9UBH6 696 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 TLK1Q9UKI8 766 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 SYNPO2Q9UMS6 1093 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 ANGPTL3Q9Y5C1 460 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 GNG2P59768 71 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 TNFAIP2Q03169 654 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 PLA2G4EQ3MJ16 856 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 BTBD8Q5XKL5 378 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 C15orf39Q6ZRI6 1047 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 HID1Q8IV36 788 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 ANKRD13AQ8IZ07 590 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 FSTL5Q8N475 847 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-229ENST00000488765 COLGALT1Q8NBJ5 622 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms