RNA–Protein interactions for RNA: ENST00000488632.1

LBR-208, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-208ENST00000488632 AFMIDQ63HM1 303 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 DPY19L2P1Q6NXN4 242 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 ALKBH5Q6P6C2 394 aaKnown RBP2.44□□□□□ -2.02
LBR-208ENST00000488632 ALKAL1Q6UXT8 129 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SYT10Q6XYQ8 523 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 MMS22LQ6ZRQ5 1243 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SLC24A5Q71RS6 500 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 DEFB128Q7Z7B8 93 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SLC47A2Q86VL8 602 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 UNC93AQ86WB7 457 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 KRT73Q86Y46 540 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 LIX1LQ8IVB5 337 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 RHOT2Q8IXI1 618 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 YAF2Q8IY57 180 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SYCE1Q8N0S2 351 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 TMEM86AQ8N2M4 240 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SLC35F6Q8N357 371 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 TMEM199Q8N511 208 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 ANKRD53Q8N9V6 530 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 TMEM35BQ8NCS4 154 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 APPL2Q8NEU8 664 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 DBF4BQ8NFT6 615 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 TRIM58Q8NG06 486 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 KIF18AQ8NI77 898 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SPATA18Q8TC71 538 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 IPO4Q8TEX9 1081 aaKnown RBP2.44□□□□□ -2.02
LBR-208ENST00000488632 SLC20A1Q8WUM9 679 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 STON2Q8WXE9 905 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 RFFLQ8WZ73 363 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SECISBP2LQ93073 1101 aaKnown RBP2.44□□□□□ -2.02
LBR-208ENST00000488632 C18orf25Q96B23 403 aaPredicted RBP2.44□□□□□ -2.02
LBR-208ENST00000488632 ZNF653Q96CK0 615 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SNX22Q96L94 193 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SENP8Q96LD8 212 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 WWC2-AS2Q96NR7 200 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 MMS19Q96T76 1030 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SYT15Q9BQS2 421 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 C11orf70Q9BRQ4 267 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 TMEM175Q9BSA9 504 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SYT11Q9BT88 431 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 HTATIP2Q9BUP3 242 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 MRI1Q9BV20 369 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 C1orf43Q9BWL3 253 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 MAGEB5Q9BZ81 275 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 GPR88Q9GZN0 384 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 ENKD1Q9H0I2 346 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SDCBP2Q9H190 292 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 MTIF3Q9H2K0 278 aaKnown RBP2.44□□□□□ -2.02
LBR-208ENST00000488632 SNX25Q9H3E2 840 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 ELAC1Q9H777 363 aaKnown RBP2.44□□□□□ -2.02
LBR-208ENST00000488632 SYNCQ9H7C4 482 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SMURF2Q9HAU4 748 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 IL23AQ9NPF7 189 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 NECTIN3Q9NQS3 549 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 RGS18Q9NS28 235 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 CISHQ9NSE2 258 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 ZSCAN32Q9NX65 697 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 GDAP2Q9NXN4 497 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 HESX1Q9UBX0 185 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 NOCTQ9UK39 431 aaKnown RBP2.44□□□□□ -2.02
LBR-208ENST00000488632 KIAA1257Q9ULG3 409 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 BARX2Q9UMQ3 279 aaPredicted RBP2.44□□□□□ -2.02
LBR-208ENST00000488632 GUCA1BQ9UMX6 200 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 CNTN6Q9UQ52 1028 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 REXO2Q9Y3B8 237 aaKnown RBP2.44□□□□□ -2.02
LBR-208ENST00000488632 PLEKHM1Q9Y4G2 1056 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 TESMINQ9Y4I5 508 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 PCDHB7Q9Y5E2 793 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SCINQ9Y6U3 715 aa2.44□□□□□ -2.02
LBR-208ENST00000488632 SF3B1O75533 1304 aaKnown RBP eCLIP2.43□□□□□ -2.02
LBR-208ENST00000488632 PLXNA2O75051 1894 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 CTAGE9A4FU28 777 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 TBKBP1A7MCY6 615 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 TMEM110-MUSTN1A8MSY1 372 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 BTNL10A8MVZ5 291 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 CXorf49A8MYA2 514 aaPredicted RBP2.43□□□□□ -2.02
LBR-208ENST00000488632 F8W8V4 182 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 TMEM189-UBE2V1I3L0A0 370 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 PYCARD-AS1I3L0S3 204 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 I3L4J1 428 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 O00370 1275 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 SYT5O00445 386 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 CYB561D2O14569 222 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 PPEF2O14830 753 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 ZNF263O14978 683 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 IRAK2O43187 625 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 HOXA3O43365 443 aaPredicted RBP2.43□□□□□ -2.02
LBR-208ENST00000488632 TRAPPC3O43617 180 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 BUB1O43683 1085 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 TADA2AO75478 443 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 URI1O94763 535 aaPredicted RBP2.43□□□□□ -2.02
LBR-208ENST00000488632 B3GAT3O94766 335 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 MTA2O94776 668 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 MOCS3O95396 460 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 CNOT4O95628 575 aaKnown RBP2.43□□□□□ -2.02
LBR-208ENST00000488632 TIMP1P01033 207 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 AHSGP02765 367 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 CALB1P05937 261 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 FAM163BP0C2L3 166 aa2.43□□□□□ -2.02
LBR-208ENST00000488632 ZNF888P0CJ79 500 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms