RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 HEXIM1O94992 359 aaKnown RBP15.1■□□□□ 0.01
CXCL12-207ENST00000488591 TRBC1P01850 177 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 MMP2P08253 660 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 RBP3P10745 1247 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 CD59P13987 128 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 RBL1P28749 1068 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 HNF1BP35680 557 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 RXRGP48443 463 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 NOVA1P51513 510 aaKnown RBP15.1■□□□□ 0.01
CXCL12-207ENST00000488591 THOP1P52888 689 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 YPEL5P62699 121 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 IRF4Q15306 451 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 SLC14A2Q15849 920 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 PRAMEF14Q5SWL7 426 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 DENND2CQ68D51 928 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 LPCAT1Q8NF37 534 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 SETD7Q8WTS6 366 aaKnown RBP15.1■□□□□ 0.01
CXCL12-207ENST00000488591 IFT43Q96FT9 208 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 PDLIM2Q96JY6 352 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 MCCC1Q96RQ3 725 aaPredicted RBP15.1■□□□□ 0.01
CXCL12-207ENST00000488591 TMEM131Q92545 1883 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 TP53BP1Q12888 1972 aaPredicted RBP15.09■□□□□ 0.01
CXCL12-207ENST00000488591 NPIPB15A6NHN6 443 aaPredicted RBP15.09■□□□□ 0.01
CXCL12-207ENST00000488591 ANKRD66B4E2M5 251 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 FLRT2O43155 660 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 ITGAVP06756 1048 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 ALPIP09923 528 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 CEACAM1P13688 526 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 ZNF30P17039 623 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 IGFALSP35858 605 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 PFN3P60673 137 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 CDK18Q07002 472 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 PDE1CQ14123 709 aaPredicted RBP15.09■□□□□ 0.01
CXCL12-207ENST00000488591 IHHQ14623 411 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 CNGA3Q16281 694 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 PCSK7Q16549 785 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 WSCD2Q2TBF2 565 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 PPM1JQ5JR12 505 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 ITPRIPL1Q6GPH6 555 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 ERMP1Q7Z2K6 904 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 NAXDQ8IW45 347 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 ZNF567Q8N184 647 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 FCRL5Q96RD9 977 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 MLPHQ9BV36 600 aaPredicted RBP15.09■□□□□ 0.01
CXCL12-207ENST00000488591 CARD9Q9H257 536 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 MBNL1Q9NR56 388 aaKnown RBP15.09■□□□□ 0.01
CXCL12-207ENST00000488591 FAM153AQ9UHL3 310 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 RSPH14Q9UHP6 348 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 KNL1Q8NG31 2342 aa15.09■□□□□ 0.01
CXCL12-207ENST00000488591 ASCC3Q8N3C0 2202 aaKnown RBP15.08■□□□□ 0
CXCL12-207ENST00000488591 SPTY2D1-AS1A0A0U1RR47 76 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 CAPN8A6NHC0 703 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 KCNN4O15554 427 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 SH3BP5O60239 455 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 PMPCBO75439 489 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 KCNK5O95279 499 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 PRLP01236 227 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 PCCBP05166 539 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 NFKB1P19838 968 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 MSNP26038 577 aaKnown RBP15.08■□□□□ 0
CXCL12-207ENST00000488591 HTR1BP28222 390 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 IL9RQ01113 521 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 KLF1Q13351 362 aaPredicted RBP15.08■□□□□ 0
CXCL12-207ENST00000488591 MTM1Q13496 603 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 INPP5AQ14642 412 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 PSAPL1Q6NUJ1 521 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 CRTC1Q6UUV9 634 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 DBX2Q6ZNG2 339 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 KDELC2Q7Z4H8 507 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 PIP4P1Q86T03 277 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 DEFB124Q8NES8 71 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 ATL2Q8NHH9 583 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 SPATA22Q8NHS9 363 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 RHBDD1Q8TEB9 315 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 NUS1Q96E22 293 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 COQ10AQ96MF6 247 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 SRPK1Q96SB4 655 aaKnown RBP15.08■□□□□ 0
CXCL12-207ENST00000488591 FAM118BQ9BPY3 351 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 FRMD8P1Q9BZ68 369 aaPredicted RBP15.08■□□□□ 0
CXCL12-207ENST00000488591 C10orf88Q9H8K7 445 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 UBP1Q9NZI7 540 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 LRRK1Q38SD2 2015 aa15.08■□□□□ 0
CXCL12-207ENST00000488591 GOLGA8CPA6NN73 597 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 H3BM21 787 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 ANXA9O76027 345 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 NDST3O95803 873 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 MT-CYBP00156 380 aaPredicted RBP15.07■□□□□ 0
CXCL12-207ENST00000488591 LHCGRP22888 699 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 CD68P34810 354 aaPredicted RBP15.07■□□□□ 0
CXCL12-207ENST00000488591 GRK6P43250 576 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 PRPSAP1Q14558 356 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 QPCTQ16769 361 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 ANKRD20A2Q5SQ80 823 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 FAM182AQ5T1J6 154 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 ANKRD20A1Q5TYW2 823 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 ANKRD20A3Q5VUR7 823 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 LRRC66Q68CR7 880 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 HSD11B1LQ7Z5J1 315 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 TSPAN33Q86UF1 283 aa15.07■□□□□ 0
CXCL12-207ENST00000488591 PARGQ86W56 976 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms