RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 SNIP1Q8TAD8 396 aaKnown RBP23.17■■□□□ 1.3
CUL4A-209ENST00000488558 WDR48Q8TAF3 677 aa23.17■■□□□ 1.3
CUL4A-209ENST00000488558 SCG3Q8WXD2 468 aaKnown RBP23.17■■□□□ 1.3
CUL4A-209ENST00000488558 MAML1Q92585 1016 aa23.17■■□□□ 1.3
CUL4A-209ENST00000488558 GRAMD1AQ96CP6 724 aa23.17■■□□□ 1.3
CUL4A-209ENST00000488558 COQ10AQ96MF6 247 aa23.17■■□□□ 1.3
CUL4A-209ENST00000488558 PACSIN1Q9BY11 444 aa23.17■■□□□ 1.3
CUL4A-209ENST00000488558 DEF6Q9H4E7 631 aa23.17■■□□□ 1.3
CUL4A-209ENST00000488558 AMACRQ9UHK6 382 aa23.17■■□□□ 1.3
CUL4A-209ENST00000488558 RALYQ9UKM9 306 aaKnown RBP23.17■■□□□ 1.3
CUL4A-209ENST00000488558 TTC24A2A3L6 582 aaPredicted RBP23.16■■□□□ 1.3
CUL4A-209ENST00000488558 CPED1A4D0V7 1026 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 PSMD11O00231 422 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 TNFRSF10CO14798 259 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 CYP2A6P11509 494 aaPredicted RBP23.16■■□□□ 1.3
CUL4A-209ENST00000488558 CTSEP14091 401 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 MAXP61244 160 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 COL28A1Q2UY09 1125 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 ANKRD20A8PQ5CZ79 823 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 ALG1LQ6GMV1 187 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 GKN2Q86XP6 184 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 ARL10Q8N8L6 244 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 KCTD6Q8NC69 237 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 PDCD6IPQ8WUM4 868 aaKnown RBP23.16■■□□□ 1.3
CUL4A-209ENST00000488558 TSACCQ96A04 125 aaPredicted RBP23.16■■□□□ 1.3
CUL4A-209ENST00000488558 FUBP1Q96AE4 644 aaKnown RBP23.16■■□□□ 1.3
CUL4A-209ENST00000488558 MCCC1Q96RQ3 725 aaPredicted RBP23.16■■□□□ 1.3
CUL4A-209ENST00000488558 RBM15Q96T37 977 aaKnown RBP eCLIP23.16■■□□□ 1.34e-9■■■■■ 33.8
CUL4A-209ENST00000488558 TSPY26PQ9H489 355 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 ABHD10Q9NUJ1 306 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 HAUS2Q9NVX0 235 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 DOLKQ9UPQ8 538 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 PCDHB1Q9Y5F3 818 aa23.16■■□□□ 1.3
CUL4A-209ENST00000488558 URB1O60287 2271 aaKnown RBP23.16■■□□□ 1.3
CUL4A-209ENST00000488558 CSO75390 466 aaKnown RBP23.15■■□□□ 1.3
CUL4A-209ENST00000488558 TCEA3O75764 348 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 HEXIM1O94992 359 aaKnown RBP23.15■■□□□ 1.3
CUL4A-209ENST00000488558 PGLSO95336 258 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 GJC1P36383 396 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 TAS2R40P59535 323 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 ACOX1Q15067 660 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 CNGA3Q16281 694 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 IFI16Q16666 785 aaKnown RBP23.15■■□□□ 1.3
CUL4A-209ENST00000488558 TSR1Q2NL82 804 aaKnown RBP23.15■■□□□ 1.3
CUL4A-209ENST00000488558 ATP13A4Q4VNC1 1196 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 C19orf48Q6RUI8 117 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 CPNE8Q86YQ8 564 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 OR56A4Q8NGH8 313 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 SCRN2Q96FV2 425 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 PDXPQ96GD0 296 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 TSGA13Q96PP4 275 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 POLR1EQ9GZS1 481 aaKnown RBP23.15■■□□□ 1.3
CUL4A-209ENST00000488558 WDR26Q9H7D7 661 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 PPIL1Q9Y3C6 166 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 NBEAQ8NFP9 2946 aa23.15■■□□□ 1.3
CUL4A-209ENST00000488558 PDE2AO00408 941 aaPredicted RBP23.14■■□□□ 1.29
CUL4A-209ENST00000488558 MATN3O15232 486 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 TLX3O43711 291 aaPredicted RBP23.14■■□□□ 1.29
CUL4A-209ENST00000488558 AKR1B10O60218 316 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 BRINP1O60477 761 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 MFAP3LO75121 409 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 TNFP01375 233 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 CELA2BP08218 269 aaPredicted RBP23.14■■□□□ 1.29
CUL4A-209ENST00000488558 TGM2P21980 687 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 CES1P23141 567 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 ACTN2P35609 894 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 EIF2S3P41091 472 aaKnown RBP23.14■■□□□ 1.29
CUL4A-209ENST00000488558 ARMC12Q5T9G4 340 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 PNCKQ6P2M8 343 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 USP45Q70EL2 814 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 CBARPQ8N350 705 aaPredicted RBP23.14■■□□□ 1.29
CUL4A-209ENST00000488558 NUS1Q96E22 293 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 FGF22Q9HCT0 170 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 NT5MQ9NPB1 228 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 PADI4Q9UM07 663 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 ASXL3Q9C0F0 2248 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 CELSR3Q9NYQ7 3312 aa23.14■■□□□ 1.29
CUL4A-209ENST00000488558 TMEM202A6NGA9 273 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 ZNF487B1APH4 448 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 FZD6O60353 706 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 DXOO77932 396 aaKnown RBP23.13■■□□□ 1.29
CUL4A-209ENST00000488558 KRT10P13645 584 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 MX2P20592 715 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 LHCGRP22888 699 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 CCNCP24863 283 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 TEAD1P28347 426 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 ISXQ2M1V0 245 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 TBC1D25Q3MII6 688 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 PERM1Q5SV97 790 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 RD3Q7Z3Z2 195 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 PDZD3Q86UT5 571 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 VSIG1Q86XK7 387 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 LSMEM2Q8N112 164 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 NDUFAF2Q8N183 169 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 HNRNPLLQ8WVV9 542 aaKnown RBP23.13■■□□□ 1.29
CUL4A-209ENST00000488558 OR1E3Q8WZA6 343 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 FGF11Q92914 225 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 DTD2Q96FN9 168 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 SEMA3CQ99985 751 aa23.13■■□□□ 1.29
CUL4A-209ENST00000488558 NPIPB15A6NHN6 443 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms