RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 HEXIM1O94992 359 aaKnown RBP11.08□□□□□ -0.64
UBE4B-210ENST00000488228 NDST3O95803 873 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 CYP2A6P11509 494 aaPredicted RBP11.08□□□□□ -0.64
UBE4B-210ENST00000488228 GM2AP17900 193 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 VPS41P49754 854 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 CLDN2P57739 230 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 RPL26P61254 145 aaKnown RBP11.08□□□□□ -0.64
UBE4B-210ENST00000488228 PRPSAP1Q14558 356 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 SF3A2Q15428 464 aaKnown RBP11.08□□□□□ -0.64
UBE4B-210ENST00000488228 TRIP13Q15645 432 aaPredicted RBP11.08□□□□□ -0.64
UBE4B-210ENST00000488228 TRIM61Q5EBN2 209 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 SIRPB2Q5JXA9 342 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 LIPIQ6XZB0 460 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 GSTA5Q7RTV2 222 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 HSD11B1LQ7Z5J1 315 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 RUBCNQ92622 972 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 MAGOHBQ96A72 148 aaKnown RBP11.08□□□□□ -0.64
UBE4B-210ENST00000488228 SCRN2Q96FV2 425 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 ADGRE3Q9BY15 652 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 SLC17A9Q9BYT1 436 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 AASDHPPTQ9NRN7 309 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 HOMER3Q9NSC5 361 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 RPL26L1Q9UNX3 145 aaKnown RBP11.08□□□□□ -0.64
UBE4B-210ENST00000488228 ZNF711Q9Y462 761 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 PCDHGA5Q9Y5G8 931 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 SPO11Q9Y5K1 396 aa11.08□□□□□ -0.64
UBE4B-210ENST00000488228 ZFC3H1O60293 1989 aaKnown RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 C1orf232A0A0U1RR37 186 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 A0A1B0GTW7 788 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 ANKRD66B4E2M5 251 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 TM7SF2O76062 418 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 AGTP01019 485 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 WNT1P04628 370 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 C1SP09871 688 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 HNRNPA2B1P22626 353 aaKnown RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 AKT2P31751 481 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 STIP1P31948 543 aaKnown RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 RPL22P35268 128 aaKnown RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 ADRA1AP35348 466 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 HOXD12P35452 270 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 IGFALSP35858 605 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 COILP38432 576 aaPredicted RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 PLA2G5P39877 138 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 TERF1P54274 439 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 ARHGEF7Q14155 803 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 ACOX1Q15067 660 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 IRF4Q15306 451 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 PARP6Q2NL67 630 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 PLA2G2CQ5R387 149 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 CCDC137Q6PK04 289 aaKnown RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 CRTC1Q6UUV9 634 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 GCNT7Q6ZNI0 430 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 RFLNAQ6ZTI6 216 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 LYSMD3Q7Z3D4 306 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 PTAR1Q7Z6K3 402 aaPredicted RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 PDCD7Q8N8D1 485 aaKnown RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 TMEM145Q8NBT3 493 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 ZNF592Q92610 1267 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 FAM122AQ96E09 287 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 TBL1YQ9BQ87 522 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 C1QTNF2Q9BXJ5 285 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 RAB6BQ9NRW1 208 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 PIH1D1Q9NWS0 290 aaKnown RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 SUSD2Q9UGT4 822 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 SHOC2Q9UQ13 582 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 DMTF1Q9Y222 760 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 DRG1Q9Y295 367 aaKnown RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 PPIL1Q9Y3C6 166 aa11.07□□□□□ -0.64
UBE4B-210ENST00000488228 PTPRZ1P23471 2315 aaPredicted RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 ASCC3Q8N3C0 2202 aaKnown RBP11.07□□□□□ -0.64
UBE4B-210ENST00000488228 A0A1B0GVT2 93 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 LOC285095A0A1B0GVY8 99 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 LNP1A1A4G5 178 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 PRAMEF26H0Y7S4 382 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 AURKAO14965 403 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 RECQL5O94762 991 aaPredicted RBP11.06□□□□□ -0.64
UBE4B-210ENST00000488228 CLDN7O95471 211 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 PAK4O96013 591 aaPredicted RBP11.06□□□□□ -0.64
UBE4B-210ENST00000488228 PCCBP05166 539 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 FGF1P05230 155 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 GNSP15586 552 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 HLA-DPA1P20036 260 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 NFKBIAP25963 317 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 ACTN2P35609 894 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 NUDT1P36639 197 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 ETV3P41162 512 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 DPP6P42658 865 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 TNNT3P45378 269 aaPredicted RBP11.06□□□□□ -0.64
UBE4B-210ENST00000488228 FNTAP49354 379 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 CSNK1EP49674 416 aaKnown RBP11.06□□□□□ -0.64
UBE4B-210ENST00000488228 AFF3P51826 1226 aaKnown RBP11.06□□□□□ -0.64
UBE4B-210ENST00000488228 STC1P52823 247 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 RACK1P63244 317 aaKnown RBP11.06□□□□□ -0.64
UBE4B-210ENST00000488228 GRIK2Q13002 908 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 SGCGQ13326 291 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 SLC1A5Q15758 541 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 KCTD11Q693B1 232 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 ZSCAN30Q86W11 494 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 KLHL7Q8IXQ5 586 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms