RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ACTN2P35609 894 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 MMP13P45452 471 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 RPIAP49247 311 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 TRAF2Q12933 501 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 MTM1Q13496 603 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 ELOCQ15369 112 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 HADHQ16836 314 aaKnown RBP11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 ISXQ2M1V0 245 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 ZSCAN23Q3MJ62 389 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 FAM182AQ5T1J6 154 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 ZFYVE27Q5T4F4 411 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 ESRP1Q6NXG1 681 aaKnown RBP11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 SFTPA2Q8IWL1 248 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 BBS5Q8N3I7 341 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 FSTL5Q8N475 847 aaPredicted RBP11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 NIPA2Q8N8Q9 360 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 KYQ8NBH2 561 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 TEKT4Q8WW24 435 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 SCG3Q8WXD2 468 aaKnown RBP11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 OR1E3Q8WZA6 343 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 ATXN7L3BQ96GX2 97 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 ZNF599Q96NL3 588 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 SMIM14Q96QK8 99 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 NUDCD1Q96RS6 583 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 CCDC3Q9BQI4 270 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 LGR4Q9BXB1 951 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 PACSIN1Q9BY11 444 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 GOLGA6AQ9NYA3 693 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 NCKIPSDQ9NZQ3 722 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 CTTNBP2NLQ9P2B4 639 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 GPR34Q9UPC5 381 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 TTLL3Q9Y4R7 772 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 RAI2Q9Y5P3 530 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 BAHCC1Q9P281 2608 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 ITPR1Q14643 2758 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 PMS2P1A4D2B8 440 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 RRP8O43159 456 aaKnown RBP11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 MFSD11O43934 449 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 ALPIP09923 528 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 CR2P20023 1033 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 IL4RP24394 825 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 TAS2R40P59535 323 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 COL9A2Q14055 689 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 AGERQ15109 404 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 CNGA3Q16281 694 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 TBC1D25Q3MII6 688 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 SOWAHCQ53LP3 525 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 MARC1Q5VT66 337 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 RBM44Q6ZP01 1051 aaKnown RBP11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 TAF8Q7Z7C8 310 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 TSPAN33Q86UF1 283 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 GKN2Q86XP6 184 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 SDR16C5Q8N3Y7 309 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 OR56A4Q8NGH8 313 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 ATL2Q8NHH9 583 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 CCL4L1Q8NHW4 92 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 TBATAQ96M53 351 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 BBC3Q96PG8 261 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 LGMNQ99538 433 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 MGME1Q9BQP7 344 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 CYP4F12Q9HCS2 524 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 FGF22Q9HCT0 170 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 RABGEF1Q9UJ41 708 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 SATB2Q9UPW6 733 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.33□□□□□ -0.66e-6■□□□□ 9.8
NIPAL3-207ENST00000488155 ENTPD2Q9Y5L3 495 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 IGSF10Q6WRI0 2623 aa11.33□□□□□ -0.6
NIPAL3-207ENST00000488155 A0A1W2PNU3 283 aaPredicted RBP11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 NPIPB15A6NHN6 443 aaPredicted RBP11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 HTRA2O43464 458 aaPredicted RBP11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 PDHA1P08559 390 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 LHCGRP22888 699 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 VIPR1P32241 457 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 HSPA9P38646 679 aaKnown RBP11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 ETV3P41162 512 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 CCL7P80098 99 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 SPIDRQ14159 915 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 DPYSL3Q14195 570 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 ARMC12Q5T9G4 340 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 NCBP2-AS2Q69YL0 99 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 PNCKQ6P2M8 343 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 RFLNAQ6ZTI6 216 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 HSD11B1LQ7Z5J1 315 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 ARL10Q8N8L6 244 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 Q8N9G6 341 aaPredicted RBP11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 KCTD6Q8NC69 237 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 FAM46DQ8NEK8 389 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 SNIP1Q8TAD8 396 aaKnown RBP11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 NAT6Q93015 286 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 CCDC74AQ96AQ1 378 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 IQCDQ96DY2 449 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 NUS1Q96E22 293 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 COQ10AQ96MF6 247 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 SEMA3CQ99985 751 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 TMEM168Q9H0V1 697 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 DEF6Q9H4E7 631 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 POLR1BQ9H9Y6 1135 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 WDR70Q9NW82 654 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 CD84Q9UIB8 345 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 PHTF1Q9UMS5 762 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms